Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_I02
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41007-20|AAA82275.1| 455|Caenorhabditis elegans Hypothetical p... 234 6e-62
U41007-21|AAK84502.1| 465|Caenorhabditis elegans Hypothetical p... 229 1e-60
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 37 0.019
Z72514-8|CAA96677.3| 416|Caenorhabditis elegans Hypothetical pr... 30 2.2
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 2.9
U53342-1|AAA96213.2| 371|Caenorhabditis elegans Suppressor of a... 29 2.9
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 2.9
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 29 3.8
U56963-4|AAB38117.2| 316|Caenorhabditis elegans Serpentine rece... 29 3.8
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 29 3.8
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 29 3.8
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 28 6.6
U53342-2|AAA96214.1| 272|Caenorhabditis elegans Suppressor of a... 28 6.6
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 6.6
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 28 8.7
U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine rece... 28 8.7
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 28 8.7
AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical ... 28 8.7
>U41007-20|AAA82275.1| 455|Caenorhabditis elegans Hypothetical
protein C33H5.18a protein.
Length = 455
Score = 234 bits (572), Expect = 6e-62
Identities = 107/217 (49%), Positives = 148/217 (68%), Gaps = 6/217 (2%)
Frame = +2
Query: 152 EMSEIRQRRG-DGDGNQKIEAAVESDHVDSEEEKVLE-----EKYVDELAKSLPQGTDKT 313
E +++RQRR + +++ A D + +E +E E ++ L +++PQ
Sbjct: 8 ENADVRQRRAPESPVTERLRAPARDDARPTSDESDMEGILQDEDRLERLTQAIPQDKGSL 67
Query: 314 PEILDSALSGLSTRWRNWVIRGIFTWLMIGGFCLLIYGGPLALMITVLCVQVKCFEEIIN 493
DS L L RWRNWV+RG+F+ +MI F ++ G LM V +Q KCF+EII+
Sbjct: 68 GVFADSMLEALPPRWRNWVVRGLFSIIMISTFTFIVTRGATWLMFLVFLIQFKCFQEIIS 127
Query: 494 IGYAVYRVHGLPWFRSLSWYFLLTSNYFFYGENLIDYFGVVINRTDYLKFLVTYHRFISF 673
IG AVYR++ PWFR+LSWYFLLTSNYFF+GE+LIDY+G+V+ + ++L FLV YHR +SF
Sbjct: 128 IGLAVYRLYDFPWFRALSWYFLLTSNYFFFGESLIDYWGIVLKKDNFLHFLVAYHRLVSF 187
Query: 674 SLYCVGFVWFVLSLVKRYYMRQFXLFAWTHVALLIVV 784
+LYC+GFV FVLSL K YYMRQF LFAWTH+ LL++V
Sbjct: 188 ALYCIGFVSFVLSLRKGYYMRQFSLFAWTHLTLLLIV 224
>U41007-21|AAK84502.1| 465|Caenorhabditis elegans Hypothetical
protein C33H5.18b protein.
Length = 465
Score = 229 bits (561), Expect = 1e-60
Identities = 100/184 (54%), Positives = 134/184 (72%)
Frame = +2
Query: 233 DSEEEKVLEEKYVDELAKSLPQGTDKTPEILDSALSGLSTRWRNWVIRGIFTWLMIGGFC 412
DS+ +E+ ++ L +++PQ DS L L RWRNWV+RG+F+ +MI F
Sbjct: 51 DSDAGSKNKEEKLERLTQAIPQDKGSLGVFADSMLEALPPRWRNWVVRGLFSIIMISTFT 110
Query: 413 LLIYGGPLALMITVLCVQVKCFEEIINIGYAVYRVHGLPWFRSLSWYFLLTSNYFFYGEN 592
++ G LM V +Q KCF+EII+IG AVYR++ PWFR+LSWYFLLTSNYFF+GE+
Sbjct: 111 FIVTRGATWLMFLVFLIQFKCFQEIISIGLAVYRLYDFPWFRALSWYFLLTSNYFFFGES 170
Query: 593 LIDYFGVVINRTDYLKFLVTYHRFISFSLYCVGFVWFVLSLVKRYYMRQFXLFAWTHVAL 772
LIDY+G+V+ + ++L FLV YHR +SF+LYC+GFV FVLSL K YYMRQF LFAWTH+ L
Sbjct: 171 LIDYWGIVLKKDNFLHFLVAYHRLVSFALYCIGFVSFVLSLRKGYYMRQFSLFAWTHLTL 230
Query: 773 LIVV 784
L++V
Sbjct: 231 LLIV 234
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +2
Query: 77 ELIGRA*SLSP-QLNKCSGKVLN*GLEMSEIRQRRGDGDGNQKIEAAVESDHVDSEEEKV 253
E++G+ SL+P Q+ +GK+ +++ I + + GN+ I A +ES V + +E
Sbjct: 331 EVLGKEISLTPDQITDLTGKIKESLAKINNIDEILNETRGNKSIAANLESRAVKANKEAE 390
Query: 254 LEEKYVDELAKSLPQGTDKTPEILDSALSGLST 352
L +K ++E+ ++L Q D+ + S L + T
Sbjct: 391 LLQKAMEEIREAL-QLADQAYNNVTSVLEEIDT 422
>Z72514-8|CAA96677.3| 416|Caenorhabditis elegans Hypothetical
protein T10B10.5 protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 602 YFGVVINRTDYLKFLVTYHRFISFSL-YCVGFVWFVLSLVKRYYMRQFXLFAWTHV 766
YF V + + V + + FS+ CVG+ W L + ++ W V
Sbjct: 217 YFSVTSQQVSICRLEVMVYDYDQFSVDECVGYCWLTLGRINEHFEHDLPTLFWAEV 272
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 530 WFRSLSWYFLLTSNYFFYGENLIDYFGVVINRTDYLKF 643
W + Y +L FY E L+D +G +++ D L F
Sbjct: 272 WSLGICMYEMLYGTTPFYSERLVDTYGKIMSHQDMLDF 309
>U53342-1|AAA96213.2| 371|Caenorhabditis elegans Suppressor of
activated let-60ras protein 7, isoform b protein.
Length = 371
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 431 PLALMITVLCVQVKCFEEIINIGYAVYRVHGLPWFRSLSWYFLLTSNYFFYGENLIDYF 607
P+A L + I ++ Y +H +P F +L +LT FFY N +DYF
Sbjct: 151 PIAYHTLYLSTADLVIKAIFSVIYNALSIHFVPNFIALVAPPVLTILIFFYNVNELDYF 209
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 152 EMSEIRQRRGDGDGNQ-KIEAAVESDHVDSEEEKVLEEKYVDELAKSLPQGTD---KTPE 319
E + + D D Q K AVE D D E+E+ +E DE + + T+ KTP
Sbjct: 265 EDDDEEEEESDDDAPQVKKSVAVEEDEEDEEDEEEIEMDEEDEEEEEDEEETEPVAKTPA 324
Query: 320 ILDSALSGLSTR 355
+ S S ST+
Sbjct: 325 VKSSLKSVDSTK 336
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
protein K11D9.2b protein.
Length = 1004
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 422 YGGPLALMITVLCVQVKCFEEIINIGYAVYRVHGLPWFRSLSWYF 556
+G L+ +I+V+CV V INIG+ HG W + +YF
Sbjct: 258 FGEQLSKVISVICVAVWA----INIGHFNDPAHGGSWVKGAIYYF 298
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
protein K11D9.2a protein.
Length = 1059
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 422 YGGPLALMITVLCVQVKCFEEIINIGYAVYRVHGLPWFRSLSWYF 556
+G L+ +I+V+CV V INIG+ HG W + +YF
Sbjct: 258 FGEQLSKVISVICVAVWA----INIGHFNDPAHGGSWVKGAIYYF 298
>U56963-4|AAB38117.2| 316|Caenorhabditis elegans Serpentine
receptor, class v protein29 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 389 WLMIGGFCLLIYGGPLALMITVLCVQVKCFEE 484
W + G +C+ I+ PL LM+ V ++++C+ +
Sbjct: 7 WPLHGFYCVSIFTIPLYLMVLVCLLKLRCYSK 38
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +2
Query: 152 EMSEIRQRRGDGDGNQKIEAAVESDHVDSEEEKVLEEKYVDELAKSLPQGTDKTPEILDS 331
EM++ GDG+ KI A + E+ + +++ D++ + +PQ ++ D+
Sbjct: 483 EMTQRMTDLGDGEHVNKIRAQLNKMDALQEDMEKAQDRIRDKVERQIPQDLNELSAKADN 542
Query: 332 ALSGLSTRWRN 364
L+TR N
Sbjct: 543 IKHQLNTRIDN 553
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 422 YGGPLALMITVLCVQVKCFEEIINIGYAVYRVHGLPWFRSLSWYF 556
+G L+ +I+V+CV V INIG+ HG W + +YF
Sbjct: 258 FGEQLSKVISVICVAVWA----INIGHFNDPAHGGSWVKGAIYYF 298
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 570 LEVNRKYQDKERNHGRPWTR*TAYPMLMISS 478
LE+N K D E GR WT T YP + +SS
Sbjct: 463 LEINGKPFDIEE-FGRCWTHQTGYPTVYVSS 492
>U53342-2|AAA96214.1| 272|Caenorhabditis elegans Suppressor of
activated let-60ras protein 7, isoform a protein.
Length = 272
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 485 IINIGYAVYRVHGLPWFRSLSWYFLLTSNYFFYGENLIDYF 607
I ++ Y +H +P F +L +LT FFY N +DYF
Sbjct: 28 IFSVIYNALSIHFVPNFIALVAPPVLTILIFFYNVNELDYF 68
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 230 VDSEEEKVLEEKYVDELAKSLPQGTDKT 313
+D+ K LEE VDELAK+L + D T
Sbjct: 178 MDNGMRKELEEALVDELAKNLGETIDNT 205
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 155 MSEIRQRRGDGDGNQKIEAAVESDHVDSEEEKVLEEKY-VDELAKSLPQGTDKTPEILD 328
++++R+ GD +K A +D+ +++ +K+ EE Y D + L DK ++D
Sbjct: 373 VNDLRKTHGDKTEQRKSTLATITDNFETQVDKLKEESYEKDLIINELRSERDKYAAMVD 431
>U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 1 protein.
Length = 288
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -2
Query: 344 VQKAQSQGFLEFCQCLAVRTSLARPHTSLLGLSPLQSRHDPTRQQLLFSGFHRR----LP 177
V A+S F + +V T + T L+ +S ++ R + ++L ++ + LP
Sbjct: 188 VSWARSTLFFSILRLTSVITIVVATTTMLIKMSRMKKRIRESERRLCWASVYLSVCYLLP 247
Query: 176 AVALFHSFLILS*ALYHCTYLIAG 105
A+A F FL+L L+ + ++ G
Sbjct: 248 AIAEFEYFLVLKAKLFENSGILHG 271
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 113 LNKCSGKVLN*GLEMSEIRQRRGDGDGNQKIEAAVESDHVDSEEEKVLEEKYVDE-LAKS 289
LNK G L+ E + +R DGN A V+ + V +E ++E LAK+
Sbjct: 14 LNKSLGNSLSNDREKTRKSHQRAKYDGNDIENPAFMEHEVNHYIDSVTDETSLEEFLAKA 73
Query: 290 LPQGTDKTPE 319
GT+ T E
Sbjct: 74 ELAGTEFTAE 83
>AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical
protein Y81B9A.1 protein.
Length = 579
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 376 WNIYMVDDRRFLFADLRWTSRSHDYGPLRS 465
W +Y D F FAD++ S +H+ P R+
Sbjct: 133 WRVYRDTDNEFPFADIQRYSYTHENPPRRA 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,428,235
Number of Sequences: 27780
Number of extensions: 353902
Number of successful extensions: 1372
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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