Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I02
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.80 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   5.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.6  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   5.6  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2

Query: 149 LEMSEIRQRRGDGDGNQKIEAAVESDHVDSEEEK 250
           LE+ +I    G+G     + +  +SD+ D   EK
Sbjct: 178 LEVPQINLEWGEGSSGDDLSSEWDSDYTDKSNEK 211


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = +2

Query: 155 MSEIRQRRGDGDGNQKIEAAVESDHVDSEEEKVLEEKYVDELAKSLPQ 298
           ++E +QRR   +  Q +E  +  +   +E+E++L     + +A  + Q
Sbjct: 204 LTEFQQRRAFLETRQSLEVQLVIEEQSTEQERLLLSVLPEHVAVKMRQ 251


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -3

Query: 526 ETMDTVDCISNVDDLFKTLHLNAEDRNHESERS 428
           +TMDT+D +  +D + +   ++  DR    +R+
Sbjct: 475 DTMDTMDTMDRMDRMDRMDRMDRMDRMDTMDRT 507


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -3

Query: 517 DTVDCISNVDDLFKTLHLNAEDRNHESERSTVDQQTETSDHQPC 386
           D +    N DD F  L  N  D +    + T+D ++ T  +  C
Sbjct: 209 DALIVYQNADDSFHRLTSNTFDYDPRYAKMTIDGESFTLKNGIC 252


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 723 ATTCGSSXCSLGPTSLC 773
           ++ CG   C+ GP  LC
Sbjct: 53  SSACGIVQCAKGPDELC 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,211
Number of Sequences: 438
Number of extensions: 4409
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)