Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_H21
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 83 2e-16
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 83 2e-16
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 83 2e-16
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 83 2e-16
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 69 3e-12
U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane r... 51 6e-07
AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell... 51 6e-07
AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell... 51 6e-07
U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane r... 40 0.001
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 40 0.001
AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell... 40 0.001
AC084197-27|AAG23467.2| 314|Caenorhabditis elegans Hypothetical... 37 0.010
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 2.7
AF025452-5|AAK71872.1| 336|Caenorhabditis elegans Serpentine re... 28 4.7
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical pr... 27 8.2
AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein. 27 8.2
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 82.6 bits (195), Expect = 2e-16
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +2
Query: 461 QQPRCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
++ +C+ ITIP+C+GIGYN+TSFPN+ H+ QEEAGL VHQ++PLVE+ C L
Sbjct: 21 KRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHL 74
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 82.6 bits (195), Expect = 2e-16
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +2
Query: 461 QQPRCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
++ +C+ ITIP+C+GIGYN+TSFPN+ H+ QEEAGL VHQ++PLVE+ C L
Sbjct: 21 KRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHL 74
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 82.6 bits (195), Expect = 2e-16
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +2
Query: 461 QQPRCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
++ +C+ ITIP+C+GIGYN+TSFPN+ H+ QEEAGL VHQ++PLVE+ C L
Sbjct: 21 KRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHL 74
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 82.6 bits (195), Expect = 2e-16
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +2
Query: 461 QQPRCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
++ +C+ ITIP+C+GIGYN+TSFPN+ H+ QEEAGL VHQ++PLVE+ C L
Sbjct: 21 KRQKCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHL 74
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
+C+ ITIPMC+ + YN T FPN L H TQ EAG + Q+ PL+++KCS D+
Sbjct: 36 KCEHITIPMCKNLDYNQTVFPNLLGHTTQSEAGPAIAQFNPLIKVKCSEDI 86
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
+C+ ITIPMC+ + YN T FPN L H TQ EAG + Q+ PL+++KCS D+
Sbjct: 36 KCEHITIPMCKNLDYNQTVFPNLLGHTTQSEAGPAIAQFNPLIKVKCSEDI 86
>U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane
receptor protein.
Length = 525
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
RCQ + MC + YNLTSFPN +D ++ ++A + Y PL+ + CS L
Sbjct: 25 RCQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQL 75
>AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell
migration protein1, isoform b protein.
Length = 529
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
RCQ + MC + YNLTSFPN +D ++ ++A + Y PL+ + CS L
Sbjct: 25 RCQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQL 75
>AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell
migration protein1, isoform a protein.
Length = 525
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSDL 622
RCQ + MC + YNLTSFPN +D ++ ++A + Y PL+ + CS L
Sbjct: 25 RCQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQL 75
>U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane
receptor LIN-17 protein.
Length = 558
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKC 610
+C I I +C+ + YN T FPN + H+ Q + PL++ KC
Sbjct: 27 KCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKC 73
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKC 610
+C I I +C+ + YN T FPN + H+ Q + PL++ KC
Sbjct: 27 KCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKC 73
>AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform a protein.
Length = 558
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 470 RCQDITIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKC 610
+C I I +C+ + YN T FPN + H+ Q + PL++ KC
Sbjct: 27 KCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKC 73
>AC084197-27|AAG23467.2| 314|Caenorhabditis elegans Hypothetical
protein Y73B6BL.21 protein.
Length = 314
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 467 PRCQDI--TIPMCRGIGYNLTSFPNALDHDTQEEAGLXVHQYWPLVEIKCSSD 619
P+C DI + +C GI Y PN L+H+T EA + L+ + C D
Sbjct: 35 PKCVDIPSNLSICNGIEYTQMRLPNILEHETVSEAIHASKDWESLLRLNCHPD 87
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 265 RSVTRGTTALGRRRIFLHLTDEIFSIRPSRLDYVR 161
R + RGTT G + D IF IRPS + + R
Sbjct: 2684 RMLVRGTTTHGDGGVHTSFFDHIFDIRPSNVAFSR 2718
>AF025452-5|AAK71872.1| 336|Caenorhabditis elegans Serpentine
receptor, class i protein29 protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 150 FVYYYFNEALLKVIYLSLISCARFKTI 70
F Y YFN A + +I+L L + KTI
Sbjct: 187 FYYTYFNSAYIFIIFLVLTAAGTLKTI 213
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 180 HVSITCDIRYF--VYYYFNEALLKVIYLSLISCARFKTITSVFRVRNQLK 37
++++ C I F ++YYF A + IY LIS RF ITS+ + + K
Sbjct: 86 NMNMGCPINLFHALHYYF--AYTQYIYNFLISYNRFCAITSLLDIEKRWK 133
>Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical
protein F09B12.6 protein.
Length = 570
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 204 MRYFRYGRHVSITCDIRYFVYYYFNEALLKVIYLSLISCARFKTITSVFRVRNQ 43
+R+ RY ++ CD+ Y + L+ +++ L SC FR+ NQ
Sbjct: 450 VRFVRYLIAINCNCDLMQPQYLIISGILIVLMFALLFSCCMVALGEYKFRMANQ 503
>AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein.
Length = 570
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 204 MRYFRYGRHVSITCDIRYFVYYYFNEALLKVIYLSLISCARFKTITSVFRVRNQ 43
+R+ RY ++ CD+ Y + L+ +++ L SC FR+ NQ
Sbjct: 450 VRFVRYLIAINCNCDLMQPQYLIISGILIVLMFALLFSCCMVALGEYKFRMANQ 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,326,389
Number of Sequences: 27780
Number of extensions: 230707
Number of successful extensions: 607
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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