Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_H17
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 256 3e-69
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 111 1e-25
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 109 3e-25
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 102 5e-23
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 87 3e-18
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 84 2e-17
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 83 4e-17
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 81 1e-16
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 33 0.055
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 28 1.2
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 28 1.6
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 27 2.7
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 26 6.3
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 6.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 25 8.3
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 256 bits (626), Expect = 3e-69
Identities = 123/216 (56%), Positives = 164/216 (75%)
Frame = +1
Query: 76 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 255
+SLLNPKAE + AQAL VNISAA G+QDV+K+NLGP GT KMLV GAG IK+TKDG VL
Sbjct: 2 LSLLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVL 61
Query: 256 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 435
L EMQIQ+PTAS IA+ LL+GELLKQA+++I EGLHP +I++GF
Sbjct: 62 LTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGF 121
Query: 436 DIARNKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPG 615
++A+N++L L+S K E+ RE L++VA+TSL TK+ + + L A VDA+LTIR P
Sbjct: 122 NLAKNEALTFLDSFKTDFEVDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPD 181
Query: 616 KPVDLHMVEIMEMKHKTATETVLVKGLXMDHGARHP 723
+P+DLHMVEIM+M++++A++T L++GL +DHGARHP
Sbjct: 182 EPIDLHMVEIMKMQNRSASDTQLIRGLLLDHGARHP 217
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 111 bits (267), Expect = 1e-25
Identities = 62/205 (30%), Positives = 114/205 (55%), Gaps = 4/205 (1%)
Frame = +1
Query: 121 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 300
A+ +I A K + ++++T+LGP+G K+L+S G+I +T DG +L +M+++H A L+
Sbjct: 35 AVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLV 94
Query: 301 RXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMK 480
+ V+L G LL+QA+ I +G+HP I +G++ A +++ L+++
Sbjct: 95 QLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAIS 154
Query: 481 ISIEIARENLVDV---ARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 648
++ + EN ++ A+TSL +KV D + VDAVL++ K VD ++++
Sbjct: 155 DVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVD 214
Query: 649 EMKHKTATETVLVKGLXMDHGARHP 723
+ +T LVKG+ +D HP
Sbjct: 215 GKVGGSVDDTKLVKGVVVDKDMSHP 239
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 109 bits (263), Expect = 3e-25
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Frame = +1
Query: 133 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 312
NI AA+ + D ++T+LGPKG KM+ +G G++ +T DG +L + + HP A ++
Sbjct: 24 NIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSA 83
Query: 313 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKISIE 492
V+L G +L A+ + +G+HP +I E F A +++ ++ ++IE
Sbjct: 84 AQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE 143
Query: 493 IA-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GKPVDLHMVEIMEMKHK 663
++ RE+L+ A TSL +K+ +++L VDAVL + P VDL + I++
Sbjct: 144 LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIRIVKKLGG 203
Query: 664 TATETVLVKGLXMDHGA 714
+T L+ GL + A
Sbjct: 204 IIDDTELIPGLALTQTA 220
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 102 bits (245), Expect = 5e-23
Identities = 54/197 (27%), Positives = 110/197 (55%), Gaps = 6/197 (3%)
Frame = +1
Query: 133 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 312
N+ A I +V+K++LGP G KMLV GD+ +T DG +L + ++HP ++
Sbjct: 26 NVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQ 85
Query: 313 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVL-ESMKISI 489
V++ ELL++A+ + +HP I G+ +A ++++ + + + S+
Sbjct: 86 QQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSV 145
Query: 490 E-IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVD----LHMVEIMEM 654
+ + +E+L++VA+TS+ +K+ + +D + VDA+L+++T + + V I++
Sbjct: 146 DSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKA 205
Query: 655 KHKTATETVLVKGLXMD 705
K++ E+VLVKG ++
Sbjct: 206 HGKSSRESVLVKGYALN 222
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 86.6 bits (205), Expect = 3e-18
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Frame = +1
Query: 124 LAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 303
L NI+A +QD ++T LGP G K++V G++ I+ DG ++ + I HP A +
Sbjct: 26 LLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVD 85
Query: 304 XXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF----DIARNKSLEVLE 471
V+ GELL++A F+ +G+ +I G+ +A NK E+
Sbjct: 86 IARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAI 145
Query: 472 SMKISIE-IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIM 648
+ +S E R+ L A T++ +K+ S + T VDAVLT+ + ++ +M+ I
Sbjct: 146 HLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTL--DQEDLNENMIGIK 203
Query: 649 EMKHKTATETVLVKGL 696
++ +++LVKG+
Sbjct: 204 KVPGGAMEDSLLVKGV 219
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 83.8 bits (198), Expect = 2e-17
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Frame = +1
Query: 133 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 312
NI AAK + DV++T LGP+ +KML+ G + +T DG+ +L E+++ HP A +
Sbjct: 24 NIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELAR 83
Query: 313 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKISIE 492
++L GE+L A + +HP ++ F A +L +++ + + +
Sbjct: 84 TQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVN 143
Query: 493 I-ARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 603
+ + + RT + TK+ +D++ + AV T+
Sbjct: 144 VDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTV 181
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 83.0 bits (196), Expect = 4e-17
Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Frame = +1
Query: 121 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 300
A+ N +A + + ++ +T+LGP G K++V+ +T D ++ E+++ HP A L+
Sbjct: 27 AVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVV 86
Query: 301 RXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM- 477
V+ GELL +A+ I GL P I +G+++A + ++EVLE +
Sbjct: 87 DATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEIC 146
Query: 478 --KISIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGKPVDLHMVEI 645
KI + + L+ RT + +K + + D L+D A+LT+ + P K ++ + +
Sbjct: 147 ADKIETVESEKELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSK-FNVDNIRV 204
Query: 646 MEMKHKTATETVLVKGL 696
+++ + + +VKG+
Sbjct: 205 VKIMGSSLYNSQVVKGM 221
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 81.4 bits (192), Expect = 1e-16
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
Frame = +1
Query: 109 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGA-GDIKITKDGNVLLHEMQIQHPT 285
R A + A + D++K+ LGPKG K+L S + GDI +T DG +L + + +
Sbjct: 17 RGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAA 76
Query: 286 ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEV 465
A ++ + ELL+QA+I ++ +HP++I +G+ IA +++
Sbjct: 77 AKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDA 136
Query: 466 LESMKI--SIEIA--RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLH 633
L + I S + A R +L ++ART+L +K+ + VDAVL ++ ++
Sbjct: 137 LRASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGSTNLDNIQ 196
Query: 634 MVEIM 648
+++I+
Sbjct: 197 IIKIL 201
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 32.7 bits (71), Expect = 0.055
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 6/153 (3%)
Frame = +1
Query: 166 MKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR----XXXXXXXXXX 333
+ LGPKG ++ G KITKDG + + ++ +L AR
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
Query: 334 XXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKISIEIARENLV 513
+L + + ++ G +P + G +A + +E L++ K I + E +
Sbjct: 118 DGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTS-EEIS 176
Query: 514 DVARTSLK--TKVHPSLADVLTDACVDAVLTIR 606
VA S T + LA + + V+T++
Sbjct: 177 QVATISANGDTHIGELLAKAMERVGKEGVITVK 209
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 388 IFISEGLHPRIITEGFDIARNKSLEVLESMKI 483
+F+ E + I EGF IAR K +E LE +K+
Sbjct: 437 VFLLEEIVELCIAEGFLIARAKRVESLERVKV 468
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 487 IEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHK 663
I I L D++ T K VHPS++ L A + L +++ G + ++VE +HK
Sbjct: 7 ILITPSPLSDISTTINKPNVHPSMS--LLKALPECRLVVKSKGDKNNANVVEFPLDRHK 63
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 592 PHQRKHQLAHLQGLGGP*F*VKY 524
PHQR H A L GGP F + Y
Sbjct: 63 PHQRAHNAAALARSGGPGFSMNY 85
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 403 GLHPRIITEGFDIARNKSLE-VLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTDA 579
G P +I E +A S + ++E ++I+ + ++D + S + + ++AD+ D
Sbjct: 461 GRFPDVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDV 519
Query: 580 CV 585
CV
Sbjct: 520 CV 521
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +1
Query: 448 NKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTD 576
++SL++L+ + ++ ++ VD+ART ++ S ++V+ D
Sbjct: 270 SESLDLLDDFNYQVTVSNKSFVDIARTEYFITIY-SDSNVILD 311
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -1
Query: 237 GDLYVPSTRNQHFHRAFRTKVSFHYILNSFSC 142
G + S RN+ FHR F+ ++++ + C
Sbjct: 187 GYAFANSKRNRDFHRIFKVLPPEDHLIDDYGC 218
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,640,066
Number of Sequences: 5004
Number of extensions: 48018
Number of successful extensions: 120
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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