Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_H15
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 38 0.042
X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for L... 36 0.17
X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI repe... 36 0.17
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 36 0.17
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 36 0.23
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 36 0.23
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 36 0.23
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 36 0.23
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 36 0.23
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 36 0.23
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 36 0.23
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 36 0.23
AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein. 36 0.23
AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens ... 33 1.6
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 32 2.1
AK096400-1|BAC04777.1| 644|Homo sapiens protein ( Homo sapiens ... 31 6.4
AK091740-1|BAC03736.1| 473|Homo sapiens protein ( Homo sapiens ... 31 6.4
AK094887-1|BAC04450.1| 272|Homo sapiens protein ( Homo sapiens ... 30 8.5
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 37.9 bits (84), Expect = 0.042
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = -1
Query: 455 ICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL 282
+ + +D + A+D + +++ L LG G LK I R++Y K N + +G KL
Sbjct: 595 VIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKII------RAIYDKPTANIILNGQKL 648
Query: 281 -AFK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
AF G QG LSP+L+N+ + R + +
Sbjct: 649 EAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for
LINE-1 transposable element ORFI and II. ).
Length = 712
Score = 35.9 bits (79), Expect = 0.17
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
V +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 34 VSIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 87
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 88 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 118
>X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI
repetitive sequence (T-betaG41) 3kb downstream of
beta-globin gene. ).
Length = 140
Score = 35.9 bits (79), Expect = 0.17
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G LK I R++Y K N + G KL A
Sbjct: 35 ISIDAEKAFDKIQQCFMLKTLNKLGIDGTYLKII------RAIYDKPTANIILSGQKLEA 88
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 89 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 119
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 35.9 bits (79), Expect = 0.17
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL-AFK 273
+ +D + A+D + +++ L LG G K I +G+ N + +G KL AF
Sbjct: 246 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFK-IIRAIYGKPTA---NIILNGQKLEAFP 301
Query: 272 ---GLMQGSSLSPILYNLYTSQIYRHVTE 195
G QG LSP+L+N+ + R + +
Sbjct: 302 LKTGTRQGCPLSPLLFNIVLEVLARAIRQ 330
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL-AFK 273
+ +D + A+D + +++ L LG G K I +Y + I+ N G KL AF
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIRLN----GQKLEAFP 652
Query: 272 ---GLMQGSSLSPILYNLYTSQIYRHVTE 195
G QG LSP+L+N+ + R + +
Sbjct: 653 LKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 514 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 567
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 568 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 598
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 169 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 222
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 223 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 253
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein.
Length = 573
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 111 ISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKII------RAIYDKPTANIILNGQKLEA 164
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 165 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 195
>AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ45551 fis, clone BRTHA2037247. ).
Length = 238
Score = 32.7 bits (71), Expect = 1.6
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL-AFK 273
+ +D + A++ + +++ L LG G LK I + R+ N + +G +L AF
Sbjct: 28 ISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTA----NIILNGQQLEAFP 83
Query: 272 ---GLMQGSSLSPILYNLYTSQIYRHVTEL 192
G QG LSP+L+N+ + R + ++
Sbjct: 84 LKTGTRQGCPLSPLLFNIVLEVLARAIRQV 113
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 279
+ +D + A D + +++ L LG G K + R++Y K N + +G KL A
Sbjct: 597 ISIDAEKALDKIQQPFVLKTLNKLGIDGTYFKIM------RAIYDKPTANIILNGQKLEA 650
Query: 278 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 195
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AK096400-1|BAC04777.1| 644|Homo sapiens protein ( Homo sapiens
cDNA FLJ39081 fis, clone NT2RP7018340. ).
Length = 644
Score = 30.7 bits (66), Expect = 6.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = -1
Query: 425 YDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-AFK---GLM 264
+D + +++ L LG G K I R++Y K N + +G KL AF G
Sbjct: 3 FDKIQQPFMLKTLIKLGIDGTYFKII------RAIYDKPTANIILNGQKLEAFPLKTGTR 56
Query: 263 QGSSLSPILYNLYTSQIYRHVTE 195
QG LSP+L+N+ + R + +
Sbjct: 57 QGCPLSPLLFNIVLEVLARAIRQ 79
>AK091740-1|BAC03736.1| 473|Homo sapiens protein ( Homo sapiens
cDNA FLJ34421 fis, clone HHDPC2002963. ).
Length = 473
Score = 30.7 bits (66), Expect = 6.4
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 437 VQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-AFK-- 273
+Q A+D + +++ L LG G K I ++Y K N + +G KL AF
Sbjct: 1 MQKAFDKIQQPFMLKTLNKLGIDGTYFKII-------AIYDKPTANIILNGQKLEAFPLK 53
Query: 272 -GLMQGSSLSPILYNLYTSQIYRHVTE 195
G QG LSP+L+N+ + R + +
Sbjct: 54 TGTRQGCPLSPLLFNIVLEVLARAIRQ 80
>AK094887-1|BAC04450.1| 272|Homo sapiens protein ( Homo sapiens
cDNA FLJ37568 fis, clone BRCOC2002323. ).
Length = 272
Score = 30.3 bits (65), Expect = 8.5
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 449 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 270
+ +D + A++ + +++ L LG G +K I +Y I N L G
Sbjct: 3 ISIDAEKAFNKIKHPFMLKTLNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTG 62
Query: 269 LMQGSSLSPILYNL 228
QG LSP+L+N+
Sbjct: 63 TRQGCPLSPLLFNI 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,998,307
Number of Sequences: 237096
Number of extensions: 2419907
Number of successful extensions: 5904
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5904
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -