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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H14
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.19 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   1.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   1.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.4  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   5.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.6  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.6  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -1

Query: 330 EVARSTPPPKQRRQDSTRGCRCLALSEKHEGNIPPKKLPKP 208
           +V  + PPP     D +   +    +++H  N+PP  +P P
Sbjct: 208 DVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFNLPPGAIPVP 248


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 227 QRNSLSPAPASTRPWPWSHXXXXXXXXXIAREFYIEH 117
           + NS+S  PA+  PW  +H           R+ Y  +
Sbjct: 157 EENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRY 193


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 227 QRNSLSPAPASTRPWPWSHXXXXXXXXXIAREFYIEH 117
           + NS+S  PA+  PW  +H           R+ Y  +
Sbjct: 157 EENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRY 193


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 227 QRNSLSPAPASTRPWPWSHXXXXXXXXXIAREFYIEH 117
           + NS+S  PA+  PW  +H           R+ Y  +
Sbjct: 157 EENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRY 193


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 226 WWYVAFMFFGKRKTTAPSRAILP 294
           WWY+ F  FG    +  ++ +LP
Sbjct: 276 WWYLPFAQFGPVIDSWATQPVLP 298


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 226 WWYVAFMFFGKRKTTAPSRAILP 294
           WWY+ F  FG    +  ++ +LP
Sbjct: 276 WWYLPFAQFGPVIDSWATQPVLP 298


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 226 WWYVAFMFFGKRKTTAPSRAILP 294
           WWY+ F  FG    +  ++ +LP
Sbjct: 276 WWYLPFAQFGPVIDSWATQPVLP 298


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 226 WWYVAFMFFGKRKTTAPSRAILP 294
           WWY+ F  FG    +  ++ +LP
Sbjct: 276 WWYLPFAQFGPVIDSWATQPVLP 298


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 226 WWYVAFMFFGKRKTTAPSRAILP 294
           WWY+ F  FG    +  ++ +LP
Sbjct: 276 WWYLPFAQFGPVIDSWATQPVLP 298


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 449 QWNTDGISHQPSKQ*RNQCRPLALSS 372
           Q +   +SH+      N+C PL+LSS
Sbjct: 316 QHHQQNMSHEELSAMVNRCHPLSLSS 341


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 219 VSLVVCCLHVFRKAQDNGTLSCYPASSA 302
           V+L + CLHV         + CY AS A
Sbjct: 7   VNLALFCLHVQHSHGATDKVICYVASWA 34


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 136 RAIIEINIKNHECDHGQGRVDAGAG 210
           R IIEI+  +H  +  Q   DAG G
Sbjct: 299 RIIIEIDAPSHAGNGWQWGPDAGLG 323


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +2

Query: 356 REKYPNYSELMVCIGFFIVYLVDEIFHLCSTEINHGSPANQGLRYG 493
           R KY   + L V  GF  VY        CS +    S ++Q  +YG
Sbjct: 67  RSKYGMLARLAVEAGFDWVYYESRAHIHCSVK----SESSQAAKYG 108


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -2

Query: 239 ATYHQRNSLSPAPASTRPWPWSH 171
           A YHQ   + P      P  W H
Sbjct: 30  AGYHQGAQMGPEQQMWEPQMWHH 52


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -2

Query: 239 ATYHQRNSLSPAPASTRPWPWSH 171
           A YHQ   + P      P  W H
Sbjct: 30  AGYHQGAQMGPEQQMWEPQMWHH 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,537
Number of Sequences: 336
Number of extensions: 4336
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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