Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_H14
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical p... 54 7e-08
U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical pr... 34 0.084
U20861-15|AAA62290.2| 162|Caenorhabditis elegans Hypothetical p... 34 0.084
U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical p... 33 0.15
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 0.36
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 31 1.0
AC024882-17|AAF60937.1| 321|Caenorhabditis elegans Serpentine r... 31 1.0
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 30 1.8
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 29 2.4
Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical pr... 29 3.2
U64854-3|AAB18315.2| 304|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 28 5.5
Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z82054-3|CAB04841.2| 269|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 27 9.7
U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical pr... 27 9.7
>U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical
protein F55F8.9 protein.
Length = 477
Score = 54.4 bits (125), Expect = 7e-08
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Frame = +2
Query: 257 SARQRHPLVLSCLL-CFGGGVLLATSLVHMLPEAREK-------------YPNYSELMVC 394
S++ +H ++ CLL CF GGV LAT +H+ PE RE YP EL+ C
Sbjct: 42 SSKHKHVSLVLCLLTCFSGGVFLATCFLHLFPELRENLETLDTVHNFRIDYP-VGELLSC 100
Query: 395 IGFFIVYLVDEIFHLCSTEINHGSPANQG 481
+GFF+++ ++E+ + HG G
Sbjct: 101 LGFFLIFFLEEVVIMIIPSFAHGHGHGHG 129
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 617 TIGLLCALFVHSLLEGLAIGLQ 682
+I + AL +HS++EGLA G+Q
Sbjct: 305 SITFVLALGIHSIIEGLAFGVQ 326
>U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical
protein F30B5.7 protein.
Length = 349
Score = 50.8 bits (116), Expect = 9e-07
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
Frame = +2
Query: 284 LSCLLCFGGGVLLATSLVHMLPEAREKYPN------------YSELMVCIGFFIVYLVDE 427
LS L CF GGV LAT + ++P E Y Y + + C GFF +Y ++E
Sbjct: 45 LSYLTCFAGGVFLATCFLDIIPHINEGYEELMETYDLNWHFAYPQFVTCCGFFFIYFIEE 104
Query: 428 IFHLCSTEINHGSPANQGLRYGTERSSLL--NRDGELRERCPGE------VDNPQMCHVS 583
+ +G G + + + + DG L P E + N +M S
Sbjct: 105 ---FTTFVFGNGQQPGHGHSHSLNKGNKITTTSDGRLSPGMPKERKGSVNITNLRMEEAS 161
Query: 584 HTAPCNRSSS--GTIGLLCALFVHSLLEGLAIGLQ 682
+ S+ ++ A+ HSLLEG A+G+Q
Sbjct: 162 TWVVSDEKSNILKSLTFAVAMSFHSLLEGFALGVQ 196
>Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical
protein C06G8.3b protein.
Length = 363
Score = 48.0 bits (109), Expect = 6e-06
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Frame = +2
Query: 284 LSCLLCFGGGVLLATSLVHMLPEAREKYPNYSE------------LMVCIGFFIVYLVDE 427
LS L CF GGV +AT + ++P ++ Y E L +C+GFF VYL++E
Sbjct: 48 LSYLSCFSGGVFMATCFLDVMPHVQQTYGEILETYNVEFRLPMNQLFICVGFFFVYLIEE 107
Query: 428 I----FHLCSTEINHGSPANQGLRYGTERSS----LLNRDGELRERCPGEVDN--PQMCH 577
I F +HG P + E+ + + N E +D+
Sbjct: 108 ITAKVFGSGGHGHSHGPPIPLTVDIKKEKVTRVQLIENGSSSSPETLMIPIDSRTRHSLV 167
Query: 578 VSHTAPC-----NRSSSGTIGLLCALFVHSLLEGLAIGLQ 682
V TAP R+ ++ A+ HSLLEG A+G+Q
Sbjct: 168 VEETAPWVVSDEKRNLLKSLTFAIAMSFHSLLEGFALGVQ 207
>Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical
protein C06G8.3c protein.
Length = 337
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Frame = +2
Query: 284 LSCLLCFGGGVLLATSLVHMLPEAREKYPNYSE------------LMVCIGFFIVYLVDE 427
LS L CF GGV +AT + ++P ++ Y E L +C+GFF VYL++E
Sbjct: 48 LSYLSCFSGGVFMATCFLDVMPHVQQTYGEILETYNVEFRLPMNQLFICVGFFFVYLIEE 107
Query: 428 IFHLCSTEINHGSPANQGLRYGTERSSLLNRDGELRERCPGEVDNPQMCHVSHTAPCNRS 607
I HG + + + E P V + + R+
Sbjct: 108 ITAKVFGSGGHGHSHGPPIPLTVDIKKEKVTSLVVEETAPWVVSDEK-----------RN 156
Query: 608 SSGTIGLLCALFVHSLLEGLAIGLQ 682
++ A+ HSLLEG A+G+Q
Sbjct: 157 LLKSLTFAIAMSFHSLLEGFALGVQ 181
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 44.8 bits (101), Expect = 6e-05
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Frame = +2
Query: 251 SESARQRHP-LVLSCLLCFGGGVLLATSLVHMLPEAREKY------PNYS------ELMV 391
++SA +H L+LS CF GGV L+ + MLP+ E + NY+ +L+
Sbjct: 35 TKSAIHQHSSLILSLFSCFAGGVFLSVCFLDMLPDCLEAWESVQTDTNYTSDYPFVQLIA 94
Query: 392 CIGFFIVYLVDEIFH-LCSTEINHGSP----ANQGLRYGTER----SSLLNRDGELRERC 544
+GFF VYL +E+ +C+ H + + R S+ N +G L E C
Sbjct: 95 LLGFFFVYLTEELSSVICNVGHGHSHSNDPIMESNVTFPRARLATVGSIFNVEGNLVEPC 154
Query: 545 PGEVDNPQMCHVSHTAPCNRSSSGTIGLLCALFVHSLLEGLAIGLQXD 688
++N P +S I A +H E A G+Q D
Sbjct: 155 KRSLEN---YDDDGEGPVRQS----IIFTSAFILHVFFECFAFGIQED 195
>Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical
protein F31C3.4 protein.
Length = 318
Score = 43.2 bits (97), Expect = 2e-04
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 8/178 (4%)
Frame = +2
Query: 185 KVVSMLALGLGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLP---EA 355
+ V ++ L +F GM+ + + H +LS + C GGGV L L+ +LP E+
Sbjct: 33 RAVLLIVLFALTFAAGMIATFLKGEWARSH--ILSFISCIGGGVFLGACLLDLLPDSIES 90
Query: 356 REKYPNYSEL-----MVCIGFFIVYLVDEIFHLCSTEINHGSPANQGLRYGTERSSLLNR 520
EK +E V +GF +V +D++ G + E +
Sbjct: 91 FEKTKIATEFPVPLAFVAVGFLLVLTIDQVVKAAKDRNVFGHVGYHIHSHNHEHQR--SE 148
Query: 521 DGELRERCPGEVDNPQMCHVSHTAPCNRSSSGTIGLLCALFVHSLLEGLAIGLQXDGT 694
DGE +E E D +SS G L+ AL VH+L EGL++ + D +
Sbjct: 149 DGESQE----EGDE----------AAAQSSIGVAMLVLALSVHALFEGLSLAVTSDAS 192
>Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical
protein C14H10.1 protein.
Length = 353
Score = 34.3 bits (75), Expect = 0.084
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 284 LSCLLCFGGGVLLATSLVHMLPEAREKYPNYSELMVCI--GFFIVYLVDEI 430
L+ LL F G LLA +H+LPEA E N+ + +C+ G+ L+ ++
Sbjct: 147 LNLLLGFAIGSLLADVFLHLLPEAYESNENHVSIGLCVLAGYLTFSLISKL 197
>U20861-15|AAA62290.2| 162|Caenorhabditis elegans Hypothetical
protein C28H8.2 protein.
Length = 162
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 587 YDSRGTFEGYPPHRDIVLSILHRDSAKTISQFHISSPDWPDFHD*F 450
Y R T Y P I+ +I+ +DS+ +FH++S W F D F
Sbjct: 92 YFDRYTRTHYNPEIRIIFAIMTKDSSHMTVEFHVTSQSWFGFEDHF 137
>U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical
protein C18A3.2 protein.
Length = 363
Score = 33.5 bits (73), Expect = 0.15
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Frame = +2
Query: 284 LSCLLCFGGGVLLATSLVHMLPEAREK----------YPNY-----SELMVCIGFFIVYL 418
+S L C GV +AT + ++P R + +Y ++ +V IGF I+ +
Sbjct: 41 ISFLGCASCGVFIATCFLGLVPHVRHQEMHLRGNQTIVDSYGWIPSTDQLVIIGFLIILI 100
Query: 419 VDEIFHLCSTEINHGSPANQGLRYGTERSSLLNR---DGELRERCP--------GEVDNP 565
++I H I +G + T S +N+ + E + P E+
Sbjct: 101 TEQIIHGIGHSIGNGHSHSGHSPLATSDSIKMNKFHDEEEGEDHVPLVAMDDDADEIIFR 160
Query: 566 QMCHVSHTAP----CNRSSSGTIG-----LLCALFVHSLLEGLAIGLQXD 688
Q H AP C + G++ LL + VHS EG+A+G+Q D
Sbjct: 161 QNTSPHHHAPSSGHCRTAPGGSMNIRVWFLLLGMSVHSFFEGVALGVQND 210
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 27.9 bits (59), Expect(2) = 0.36
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 281 VLSCLLCFGGGVLLATSLVHMLPEA 355
+L LL FG G LL + +H++P A
Sbjct: 191 LLKVLLAFGSGGLLGDAFLHLIPHA 215
Score = 23.0 bits (47), Expect(2) = 0.36
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +2
Query: 395 IGFFIVYL-VDEIFHLCSTEINHGSPANQGLRYGTERSSLLNRDGELRERCPGEVDNPQM 571
+G I +L V+++ + E HG + G +G E+ +D + + E
Sbjct: 251 LGGIIAFLTVEKLVRILRGEDGHGH--SHGHSHGGEKKETKEKDSKDKVAKKEEKPEKDE 308
Query: 572 CHVSHTAPCNRSSSGTIGLLCALFVHSLLEGLAIG 676
+ TA N L A F H+ +GLAIG
Sbjct: 309 QSIKVTAYLN---------LAADFTHNFTDGLAIG 334
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = -2
Query: 353 LLATCGRGKWPE---ALHHR--SRGGRIAREG 273
L++ C RG+WPE + HHR S GG +A G
Sbjct: 1152 LVSRCNRGQWPEWIRSSHHRTFSLGGALANRG 1183
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = -2
Query: 353 LLATCGRGKWPE---ALHHR--SRGGRIAREG 273
L++ C RG+WPE + HHR S GG +A G
Sbjct: 1152 LVSRCNRGQWPEWIRSSHHRTFSLGGALANRG 1183
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 155 ILKIMNVTTAKVVSMLALGLGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATS 331
+L I T V+++LAL + S F +S+ R+ + CL CFG V AT+
Sbjct: 377 LLTICICTMFSVITILALSVLSTFEDAFGENWSKCCRRFFLALFVCLFCFGLTVYFATN 435
>AC024882-17|AAF60937.1| 321|Caenorhabditis elegans Serpentine
receptor, class z protein28 protein.
Length = 321
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 371 NYSELMVCIGFFIVYLVDEIFHL 439
N S L++C+ F +Y+ D++FHL
Sbjct: 89 NLSTLILCVCLFYLYIFDQVFHL 111
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -1
Query: 564 GLSTSPGHRSLNSPSRFSKDDLSVPYLKP*LAGLP*LISVEHRWN 430
G S S H S N+P D+SVP+ P P SV WN
Sbjct: 722 GSSFSDLHLSTNAPPTKGNIDISVPFYPPFALETPVTFSVGDGWN 766
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 212 LGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLPE 352
+GSFFG + S FSE +R ++ + F +L SL+ PE
Sbjct: 72 IGSFFGVWINSIFSERFGRRVGFLIGNSVAFISSILQCLSLIWYCPE 118
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 212 LGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLPE 352
+GSFFG + S FSE +R ++ + F +L SL+ PE
Sbjct: 72 IGSFFGVWINSIFSERFGRRVGFLIGNSVAFISSILQCLSLIWYCPE 118
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 304 RWWSASGHFPRPHVARSKGKIPELLRANGLHWFLHCLL 417
R W SGHFPR V+ + EL N HW L C+L
Sbjct: 221 RHWQESGHFPR--VSFCDINVREL--GNIHHWSLQCVL 254
>Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical
protein T01D3.5 protein.
Length = 381
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 203 ALGLGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLPEARE 361
A+ GS+ G +P FS S + + + FG G+L+ T+L ++PE E
Sbjct: 13 AMFFGSYMAGSIPLMFSLSESR-----IRLVSIFGAGLLVGTALSVIIPEGIE 60
>U64854-3|AAB18315.2| 304|Caenorhabditis elegans Hypothetical
protein K11C4.2 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 239 PSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLPEAREKYPNYSELMVCIGFFIVYL 418
PS + SA H V + F ++L +++PE P L++ +G F++ +
Sbjct: 28 PSFYFRSAFSSHNEVFNVWTHFIPAIILL--FAYLIPEILAPLPRVPVLILQVGIFLLLI 85
Query: 419 VDEIFHL--CSTEINH 460
+ HL +E++H
Sbjct: 86 ASSLAHLMHSRSELDH 101
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 402 KPMQTISSE*FGYFS--LASGNMWTREVARSTPPPKQRRQDSTRGCRCLALSEKHEGNIP 229
+P+Q + E S + +G +E R+TPPP+ R + + L +S+ E P
Sbjct: 534 EPLQNVQPEPSKQASELVQNGYAAPQEPRRATPPPEPLRNELPKHSDLLNVSKPSEPAEP 593
Query: 228 PKKLPKP 208
PK P
Sbjct: 594 PKPSDAP 600
>Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical
protein T11G6.2b protein.
Length = 495
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 212 LGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLPEAREKYPNYSELMV 391
+G +L FS+ R R P+V L L+AT +++ + E Y + L++
Sbjct: 313 VGGIVAAVLAGAFSDHMRSRTPVVFIML-------LMATVSLYIYAHSPESYNWNAFLLL 365
Query: 392 CIGFFI 409
GFFI
Sbjct: 366 VAGFFI 371
>Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical
protein T11G6.2a protein.
Length = 502
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 212 LGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLPEAREKYPNYSELMV 391
+G +L FS+ R R P+V L L+AT +++ + E Y + L++
Sbjct: 320 VGGIVAAVLAGAFSDHMRSRTPVVFIML-------LMATVSLYIYAHSPESYNWNAFLLL 372
Query: 392 CIGFFI 409
GFFI
Sbjct: 373 VAGFFI 378
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 284 LSCLLCFGGGVLLATSLVHMLPEA 355
L LL FG G LL +L+H++P +
Sbjct: 115 LKILLAFGAGGLLGDALLHIIPHS 138
>Z82054-3|CAB04841.2| 269|Caenorhabditis elegans Hypothetical
protein T26F2.2 protein.
Length = 269
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 446 TEINHGSPANQGLRYGTERSSLLNRDGELR 535
T + +P N+G+ Y E+ LN DGELR
Sbjct: 77 TPLTKDTP-NKGMGYNFEKYMTLNEDGELR 105
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 402 KPMQTISSE*FGYFSLASGNMWTREVARSTPPPKQR 295
KP ++ ++ G FSLA+ TR+ PPP++R
Sbjct: 129 KPQESFTA---GPFSLATSRTSTRDSGNRPPPPRER 161
>U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical
protein ZK546.5 protein.
Length = 646
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 336 TREVARSTPPPKQRRQDSTRGCRCLALSEKHEGNIPPKKLP 214
TR+ R K +R+ L ++E H N PKKLP
Sbjct: 90 TRKDVRDDEGEKVKREGYEVQSGVLTVNENHPSNFKPKKLP 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,386,276
Number of Sequences: 27780
Number of extensions: 405885
Number of successful extensions: 1055
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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