Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H14
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.69 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.69 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   8.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   8.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 211 LREFLWWYVAFMFFGKRKTTAP 276
           +++FLWWY   MF  +     P
Sbjct: 78  VQKFLWWYKQGMFLSRNAIFTP 99


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 211 LREFLWWYVAFMFFGKRKTTAP 276
           +++FLWWY   MF  +     P
Sbjct: 78  VQKFLWWYKQGMFLSRNAIFTP 99


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 635 RITILLFLMNSYCTEPYDSRG 573
           RI +L FL+ S CT P  SRG
Sbjct: 4   RILLLFFLLLSSCTRP--SRG 22


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 635 RITILLFLMNSYCTEPYDSRG 573
           RI +L FL+ S CT P  SRG
Sbjct: 4   RILLLFFLLLSSCTRP--SRG 22


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 102 VKLPPRWVV 76
           VK+PPRW+V
Sbjct: 706 VKVPPRWIV 714


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 593 EPYDSRGTFEGYPPHRDIVLSIL 525
           EPY+ RGT    PP +   + ++
Sbjct: 893 EPYNQRGTVVSPPPTKRRTMKVV 915


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 593 EPYDSRGTFEGYPPHRDIVLSIL 525
           EPY+ RGT    PP +   + ++
Sbjct: 931 EPYNQRGTVVSPPPTKRRTMKVV 953


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 108 VTVKLPPRWVV 76
           +TV +PPRW++
Sbjct: 673 LTVNVPPRWIL 683


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 475 SGLEIWN*EIVFAESRWR 528
           +G++IWN ++     RW+
Sbjct: 54  NGMQIWNDKVFITIPRWK 71


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 341 CGRGKWPEALHHRSRG 294
           CG GKWP   H   RG
Sbjct: 488 CGPGKWP---HEDKRG 500


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/37 (21%), Positives = 18/37 (48%)
 Frame = +2

Query: 395 IGFFIVYLVDEIFHLCSTEINHGSPANQGLRYGTERS 505
           + F ++     I +LC   ++      + L+YG +R+
Sbjct: 118 VSFDVLSCTASILNLCMISVDRFCAITKPLKYGVKRT 154



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 16/76 (21%), Positives = 28/76 (36%)
 Frame = +2

Query: 179 TAKVVSMLALGLGSFFGGMLPSCFSESARQRHPLVLSCLLCFGGGVLLATSLVHMLPEAR 358
           TA ++++  + +  F     P  +      R  +V   L+  G   +    L+ M  E  
Sbjct: 126 TASILNLCMISVDRFCAITKPLKYGVKRTPRRMIVYVSLVWLGAACISLPPLLIMGNEHT 185

Query: 359 EKYPNYSELMVCIGFF 406
                 S  +VC  FF
Sbjct: 186 YSETGPSHCVVCQNFF 201


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 341 CGRGKWPEALHHRSRG 294
           CG GKWP   H   RG
Sbjct: 578 CGPGKWP---HEDKRG 590


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 111 NPVFYIKLSCDYRNKY 158
           NP+ Y  +S  YRN +
Sbjct: 312 NPILYNVMSAKYRNAF 327


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 478 GLEIWN*EIVFAESRWR 528
           G+EIW  ++     RWR
Sbjct: 71  GIEIWRNKLFVTVPRWR 87


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 199 HRHDLGRGHIH 167
           H H +G GH H
Sbjct: 415 HHHTMGHGHSH 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,064
Number of Sequences: 438
Number of extensions: 5517
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)