Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H12
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    46   2e-07
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    31   0.006
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   6.0  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 MAEAQLTFTSSWGGKRAAIAGTVSCRND-ESLASIYKLIQNEAEKLLLCQK 255
           +  AQL FT +WG KRA    +  C+   +++  IYK+IQNEA+KL+ C+K
Sbjct: 16  LCAAQLNFTPNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQKLVDCEK 65


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 31.1 bits (67), Expect = 0.006
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +1

Query: 76  FYSLXLACFI-MAEAQLTFTSSWGGKRAAIAGT--VSCRND-ESLASIYKLIQ 222
           F  + L  F+ +  AQL F++ WG +  + AG+   +C+   E++  IYK+IQ
Sbjct: 5   FLIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQ 57


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 199 PRIHRSCRTQC 167
           P++H  CR++C
Sbjct: 79  PQLHNLCRSEC 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,351
Number of Sequences: 336
Number of extensions: 1972
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)