Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H12
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormo...    38   2e-04
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   5.5  

>DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormone
           I preproprotein protein.
          Length = 79

 Score = 37.5 bits (83), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 13/74 (17%)
 Frame = +1

Query: 73  RFYSLXLAC---FIMAEAQLTFTSSWGGKR---------AAIAGTVSCRND-ESLASIYK 213
           + +++ L C    ++ EAQLTFT +WG +           +  G  +C+   +SL  IY+
Sbjct: 5   KLFTVLLICASLMLITEAQLTFTPAWGKRSQGAMGINPLGSTFGQDACKTPVDSLLVIYR 64

Query: 214 LIQNEAEKLLLCQK 255
           +IQ EA+K++ C +
Sbjct: 65  MIQAEAQKIVDCSQ 78


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 258 LSRHHRNGNTDKMPFNHYIIFS*SMKCIHKL 350
           L+ HHRN +T +M     +IF   + CI ++
Sbjct: 331 LNYHHRNADTHEMSDWVRVIFLYWLPCILRM 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,812
Number of Sequences: 2352
Number of extensions: 8160
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)