Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H09
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,557...    39   0.004
08_01_0007 - 57681-57728,58260-58336,58418-58464,58808-58908,590...    29   5.3  
02_01_0583 + 4320543-4321613,4321725-4321967,4323506-4323883           28   7.0  

>07_01_0733 +
           5570084-5570282,5570395-5570600,5572484-5572624,
           5572773-5572949,5573049-5573145,5573575-5573687,
           5573774-5573896,5574004-5574075,5575340-5575432,
           5575564-5575674,5575767-5575889,5576834-5576890,
           5576939-5577022,5577140-5577214,5577418-5577554,
           5577719-5577853,5579029-5579168,5579334-5579399,
           5579732-5579838,5579910-5579990,5580064-5580138,
           5580224-5580325,5581837-5582005,5582090-5582217,
           5582596-5582679,5582779-5582879,5583729-5583882,
           5583964-5584038,5584112-5584262,5584463-5585078,
           5585427-5585487,5585874-5586019,5586104-5586287,
           5586363-5586440,5586603-5586931,5587023-5587199,
           5587571-5587667,5587742-5587897,5587962-5588198,
           5588271-5588354,5588426-5588486,5588762-5588898
          Length = 1912

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
 Frame = +1

Query: 352 KSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKVREL 531
           K++ P + L G VI V+   I VS+P  + G V +  + +     + +    K  +    
Sbjct: 135 KNISPNMKLWGVVIEVNQKDIVVSLPGGMRGFVRSEEVHD-----ITSQETRKDSEGSIC 189

Query: 532 SQMFKPGQYIAVSVVELAPGN--------TMLTTMPQHVNSGKRHTDIXKGAIFXAXVSS 687
           + +   GQ +   V+ +   N          L+     +  G     I  G +  A V S
Sbjct: 190 ADVVHVGQLVPCIVLRVDDDNKEGKVNKRVWLSLRLSRIYKGLSLDAIQDGMVLTAQVKS 249

Query: 688 XEXHGYVMDLGIPNTTAFLPXKD 756
            E HGY++  G+ + + F+P  D
Sbjct: 250 IEDHGYILHFGVSSFSGFMPKAD 272


>08_01_0007 -
           57681-57728,58260-58336,58418-58464,58808-58908,
           59016-59108,59418-59540,59637-59755,60154-60510,
           60888-61011
          Length = 362

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 280 YLSDEAQDYLKTHKLNNNLIFLSSKSLRPG 369
           Y+ D A ++LKTH L    + +  K+L PG
Sbjct: 316 YILDSAGEFLKTHGLQAGDVIIIYKNLAPG 345


>02_01_0583 + 4320543-4321613,4321725-4321967,4323506-4323883
          Length = 563

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 129 KDGRRGRILSARWKKAYRCT 188
           KDG R  +LS+RW++ +R T
Sbjct: 97  KDGARTAVLSSRWRRLWRST 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,354,081
Number of Sequences: 37544
Number of extensions: 307615
Number of successful extensions: 657
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)