Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H08
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0145 - 26262286-26262480,26262811-26262876,26263029-262631...    36   0.050
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420...    30   2.5  
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047...    29   3.3  
08_01_0682 + 5974622-5974745,5976182-5976371,5976953-5977024,597...    28   7.6  

>02_05_0145 -
           26262286-26262480,26262811-26262876,26263029-26263125,
           26263283-26263341,26263372-26263532,26264039-26264087,
           26264142-26264205,26264294-26264469
          Length = 288

 Score = 35.5 bits (78), Expect = 0.050
 Identities = 20/87 (22%), Positives = 40/87 (45%)
 Frame = +1

Query: 535 HWIAPFHNSLKKTLTNFKCFELEFDELQVLCNEDKSRTFVVLKTNRFSHKHFFAITKKVD 714
           H I      L++   + + + ++F++ +   N+D +R+F+ L+               VD
Sbjct: 152 HQIESLVAMLRQKFRSQQRYWMDFNKWEHFVNDDCTRSFLSLEVTSTGLPEISKQITMVD 211

Query: 715 EILSEFKLPKFYDEPSFHMSILXTNGD 795
           ++     LP+FY  P  H+S+    GD
Sbjct: 212 DVYRLHGLPEFYKNPRPHISLAWALGD 238


>07_01_0566 +
           4207894-4207974,4208090-4208144,4208671-4208759,
           4209742-4209794,4209966-4210120,4210201-4210528,
           4210618-4210730,4211394-4211538,4211951-4212259,
           4212340-4212420,4212989-4213349
          Length = 589

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 190 SYINDYGSDSTNSDSETEQHLYKRVKLPVPDLSRVRIVLTEETHIDDHQKHKGRKR 357
           SY +DY SD+ +SDS +E   Y    L     S  R    + +  D H+  KG+ +
Sbjct: 183 SYSSDY-SDTQSSDSGSESESYSSSSLDTSSSSDHRHKRRKSSKKDKHRSAKGKSK 237


>04_03_0826 +
           20103105-20103697,20104222-20104391,20104487-20104716,
           20104825-20104933,20104967-20105154,20105818-20105919,
           20106114-20106395,20106504-20106625,20106708-20107020,
           20107096-20107329,20107477-20107767,20107975-20108286
          Length = 981

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/93 (23%), Positives = 42/93 (45%)
 Frame = +1

Query: 277 PDLSRVRIVLTEETHIDDHQKHKGRKRSFPHVRGNWATFVYVQYPNDDFVNKLSRKVLDA 456
           P L+R  +     T +D+H+ H  + ++       +   +  +   +D V     K+L  
Sbjct: 422 PALARGELQCIASTTLDEHRLHFDKDKALAR---RFQPVLVNEPSQEDAV-----KILLG 473

Query: 457 LTESSHTWHKCENLHITLSKTVVLNYHWIAPFH 555
           L E   T+HKC+    +++  V L+  +IA  H
Sbjct: 474 LREKYETYHKCKYTLESINAAVYLSARYIADRH 506


>08_01_0682 +
           5974622-5974745,5976182-5976371,5976953-5977024,
           5977482-5977553,5977688-5977759,5977842-5977913,
           5978690-5978761,5978855-5978926,5979017-5979091,
           5979529-5979594,5979821-5979885,5979975-5980354,
           5980438-5980636,5980713-5980763,5980955-5981073,
           5981190-5981400,5981524-5981755,5981842-5981992,
           5982089-5982447,5982750-5982768
          Length = 890

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
 Frame = +1

Query: 511 SKTVVLNYHWIAPFHNSLKKTLTNFKCFELEFD-ELQVLCNEDKSRTFVVLKTN-RFSHK 684
           S T +L Y ++   + SL + L   K F L++    +++    +  T++  +++ R  H+
Sbjct: 617 SNTPLLVYEYLE--NGSLDRALFGSKSFNLDWPTRFEIVLGVARGLTYLHEESSVRIVHR 674

Query: 685 HFFAITKKVDEIL----SEFKLPKFYDEPSFHMS 774
              A    +D  L    S+F L K YDE   H+S
Sbjct: 675 DIKASNVLLDTDLTPKISDFGLAKLYDEKKTHIS 708


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,226,016
Number of Sequences: 37544
Number of extensions: 302980
Number of successful extensions: 702
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)