Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_H08
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian str... 34 0.14
AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical ... 34 0.14
AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical ... 34 0.14
AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical ... 34 0.14
AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical... 31 0.73
U64853-5|AAB04978.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p4... 28 6.8
U64836-9|AAG24062.2| 93|Caenorhabditis elegans Hypothetical pr... 28 9.0
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 28 9.0
AL032624-2|CAA21520.2| 447|Caenorhabditis elegans Hypothetical ... 28 9.0
>DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian
stromal interaction molecule-1 protein.
Length = 530
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 556 NSLKKTLTNFKCFELEFDELQVLCNEDKSR 645
N L LT KC E EF+++Q + N+++S+
Sbjct: 221 NELSNKLTELKCMETEFEDVQKMLNDERSK 250
>AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1c protein.
Length = 395
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 556 NSLKKTLTNFKCFELEFDELQVLCNEDKSR 645
N L LT KC E EF+++Q + N+++S+
Sbjct: 221 NELSNKLTELKCMETEFEDVQKMLNDERSK 250
>AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1a protein.
Length = 530
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 556 NSLKKTLTNFKCFELEFDELQVLCNEDKSR 645
N L LT KC E EF+++Q + N+++S+
Sbjct: 221 NELSNKLTELKCMETEFEDVQKMLNDERSK 250
>AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1b protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 556 NSLKKTLTNFKCFELEFDELQVLCNEDKSR 645
N L LT KC E EF+++Q + N+++S+
Sbjct: 221 NELSNKLTELKCMETEFEDVQKMLNDERSK 250
>AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical
protein Y71H2AM.5 protein.
Length = 121
Score = 31.5 bits (68), Expect = 0.73
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +1
Query: 424 VNKLSRKVLDALTE-SSHTWHKCENLHITLSKTVVLNYHWIAPFHNSLKKTLTNFKCFEL 600
+ + K DAL S W+K E H ++ K ++ W AP+ + +CF
Sbjct: 15 LQQYKEKFSDALRHPDSPDWYKKET-HESVKKDLL----WAAPYDARFPQVRKQRQCFAY 69
Query: 601 EFDELQVLCNEDKSRTFVVLKTNRFSHKHFFA--ITKKVDEILSEFKLPKFYD 753
D + CNE + + K + +K F T++ DE+LSE + P +D
Sbjct: 70 YVDFHR--CNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEGRFPAKFD 120
>U64853-5|AAB04978.2| 460|Caenorhabditis elegans Hypothetical
protein K11G9.5 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 69 FVPSLLHLIFRIMISVAFRRLCLN 140
F+P LH + ++ SV F LCLN
Sbjct: 338 FIPQSLHYVSVVLFSVIFSCLCLN 361
>AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p450
family protein 31A3 protein.
Length = 511
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 382 WATFVYVQYPNDDFVNKLSRKVLDALTESSHTWHKCENLHITLSKTVVL 528
W +F+Y Y D F+ K +L TE T KC + +K V++
Sbjct: 222 WNSFIYNLY--DSFIIKKVNSILFFRTEDGRTHEKCLRILHDFTKKVIV 268
>U64836-9|AAG24062.2| 93|Caenorhabditis elegans Hypothetical
protein F10G2.9 protein.
Length = 93
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 421 FVNKLSRKVLDALTESSHTWHKCENLHITLSKTVVLNYH 537
+ NKLS + D L + H KC+NLH T + T+ +YH
Sbjct: 44 YFNKLSTQ--DQLILTRHVLLKCKNLH-TSNYTMYRDYH 79
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 697 ITKKVDEILSEFKLPKFYDE 756
I +K+D I +E+++P FY+E
Sbjct: 767 IRRKIDSISTEYEIPPFYEE 786
>AL032624-2|CAA21520.2| 447|Caenorhabditis elegans Hypothetical
protein Y49A10A.1 protein.
Length = 447
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 148 DLHGCLSIKLMSCLSYINDYGSDSTNSDSETEQHLY-KRVKLPVP 279
D HGC ++ Y +D+ E E L+ KR+ LP P
Sbjct: 234 DFHGCRMKRIFKMYVYCSDHTVALIEETKEFEGQLFLKRIALPFP 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,371,108
Number of Sequences: 27780
Number of extensions: 321655
Number of successful extensions: 942
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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