Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H07
         (731 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0695 + 5730932-5731198                                           31   1.2  
05_04_0286 + 19833114-19834053,19834149-19834165                       29   2.9  
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    29   3.8  
02_02_0170 + 7395480-7395917                                           29   5.0  
08_01_0433 + 3794440-3794948,3795696-3796707                           28   6.6  
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933...    28   6.6  
06_03_0893 - 25721576-25722205,25722366-25722443,25722628-25723560     28   8.8  
04_03_1035 - 21887562-21890030                                         28   8.8  
03_02_0883 - 12142550-12142663,12142723-12142782,12142954-12143229     28   8.8  

>11_01_0695 + 5730932-5731198
          Length = 88

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +3

Query: 237 ACVRRGGNCDHRPGDCCHSSSCRCNL---WGSNC 329
           AC+  GG C  RP DCC +  C   +   +GS C
Sbjct: 53  ACLPAGGFCMFRPMDCCGNCGCLYPVGVCYGSRC 86


>05_04_0286 + 19833114-19834053,19834149-19834165
          Length = 318

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = +3

Query: 228 FRRACVRRGGNCDHRPGDCCHSSSCRCNLWGSNCRC 335
           F  AC   GG C H  GD  H   C C  W S   C
Sbjct: 251 FCGACRATGGVCGH-DGDS-HGDLCLCGDWNSTSNC 284


>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
            21260180-21260461,21261084-21261587,21261973-21261981,
            21262122-21262196,21262375-21262449,21262557-21263494,
            21263577-21263607,21263694-21263979,21264691-21264905,
            21265329-21265437,21265556-21265611,21265730-21265822,
            21266348-21266393,21266496-21267221,21267489-21267550,
            21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 114  YIDP-GDDDLEVNLPDYGEDPADLQLLQD 197
            +++P  D+ +E   PDY EDP +++L +D
Sbjct: 1193 HVEPVADEKMEDEEPDYEEDPEEVELYED 1221


>02_02_0170 + 7395480-7395917
          Length = 145

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 447 CGFRWSGGQVGWLELVAASEELRSVSPTPTSGRA 346
           CG RW   Q G +E V A+E   + +   T+ RA
Sbjct: 26  CGRRWQAQQRGRIEAVTAAEAWEATTAGATAARA 59


>08_01_0433 + 3794440-3794948,3795696-3796707
          Length = 506

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 222 YVFRRACVRRGGNCDHRPGDCCHSSSCR 305
           +  RRAC RRGG C+      C   S R
Sbjct: 18  HALRRACWRRGGRCEPGWRSRCEGDSAR 45


>05_06_0051 -
           25190803-25191216,25191301-25191891,25193248-25193317,
           25193392-25193443,25195368-25195440,25195557-25195646
          Length = 429

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 407 SSQPT*PPLHRKPQHSP 457
           +S P  PPLHR P+H P
Sbjct: 167 ASPPVPPPLHRNPRHRP 183


>06_03_0893 - 25721576-25722205,25722366-25722443,25722628-25723560
          Length = 546

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 153 ASSLPDHRLRDQYKRHEPILL 91
           A +LP H +RD  +RH P++L
Sbjct: 56  AGALPHHAMRDLARRHGPLML 76


>04_03_1035 - 21887562-21890030
          Length = 822

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +3

Query: 273 PGDCCHSSSCRCNLW-GSNCRCQRMG 347
           PG C  S SC C +W GS   C   G
Sbjct: 327 PGPCAPSKSCSCGVWSGSAQLCAGSG 352


>03_02_0883 - 12142550-12142663,12142723-12142782,12142954-12143229
          Length = 149

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 460 CWRMLWLPVERRSSRLAGVGRRFRG 386
           C ++LW+   RR++RL G GRR  G
Sbjct: 55  CGQLLWVLGFRRAARLGGQGRRPAG 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,293,319
Number of Sequences: 37544
Number of extensions: 348320
Number of successful extensions: 1083
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)