Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H07
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   3.2  
EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.           24   4.2  
EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.           24   4.2  
EF519365-1|ABP68474.1|  486|Anopheles gambiae LRIM1 protein.           24   4.2  
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        24   5.6  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 258 NCDHRPGDCCHSSSCRCNLWGSNCRCQRMGLF 353
           +CD   G C    SC+ N+ G +CR  R+G F
Sbjct: 457 SCDPVTGVC----SCKENVEGRHCRECRLGYF 484


>EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 141 EVNLPDYGEDPADLQLLQDVGKRSSLIYV 227
           ++ LP   E+ + LQLL+ + KR   +YV
Sbjct: 418 QIELPHATEEQSPLQLLRAIVKRYEEMYV 446


>EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 141 EVNLPDYGEDPADLQLLQDVGKRSSLIYV 227
           ++ LP   E+ + LQLL+ + KR   +YV
Sbjct: 418 QIELPHATEEQSPLQLLRAIVKRYEEMYV 446


>EF519365-1|ABP68474.1|  486|Anopheles gambiae LRIM1 protein.
          Length = 486

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 141 EVNLPDYGEDPADLQLLQDVGKRSSLIYV 227
           ++ LP   E+ + LQLL+ + KR   +YV
Sbjct: 418 QIELPHATEEQSPLQLLRAIVKRYEEMYV 446


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 111 SYIDPGDDDLEVNLP--DYGEDPADLQLLQDVGKRSS 215
           S +D  DD++EV+LP  ++  D   + +L  +G R +
Sbjct: 314 SLVDFDDDEVEVHLPKFEFNSDYNLIPILNQMGIREA 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,208
Number of Sequences: 2352
Number of extensions: 11695
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)