Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_H06
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical ... 118 3e-27
Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 31 1.1
Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical p... 30 1.4
U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 2.5
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 29 4.4
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 7.7
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 7.7
U80837-7|AAB37907.1| 760|Caenorhabditis elegans Hypothetical pr... 28 7.7
U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical pr... 28 7.7
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 28 7.7
>AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical
protein F38A1.8 protein.
Length = 450
Score = 118 bits (285), Expect = 3e-27
Identities = 72/224 (32%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Frame = +2
Query: 95 MLDLFSIFSKGGIVLWCFQSTSEIFSPSVN-ALIRSVILQERSGNNTFNHNALTLQYKLD 271
M++LFSIF+KGG+ LW +Q F+ ++N LI+ +++ER + T++++LD
Sbjct: 1 MIELFSIFTKGGVCLWNYQEGDYNFTEAINNELIKGTLMEERGNSGQKKVGNYTMKFQLD 60
Query: 272 NEFELVFVVAYQRILQLSYVDKFLNDVHLEFRDKYKNELQ------TGPCIVDFNFKTTF 433
NE+ ++F+V YQ I+ L+Y +K LN V FR ++ L+ T P + NF TF
Sbjct: 61 NEYNVIFLVIYQTIVNLNYAEKLLNLVVDSFRGEFSENLREETALTTPPSNIYGNFDETF 120
Query: 434 DKVLKECEIWAKSQAKIPKQMRTFEDSQKSKKTVASMI-ERKGDEKGKKTVKIVE-SKNL 607
+VL E A++ K+ +TF++S KS+KT+ S+I R G + +K+ K E +
Sbjct: 121 HEVLSEAAKSARATENTVKKPKTFQESAKSQKTIDSLIVSRPGQKNAEKSAKNAEKTPKK 180
Query: 608 TNGKAEEVTNNTYD--------DDVIAANRAKLXQKLASKTKKE 715
AEE + Y+ D+ + R ++ +K++ TKK+
Sbjct: 181 PVESAEESSATDYNSASPPGSPDEEVLRRRDQMFKKMSGNTKKK 224
>Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 584 KIVESKNLTNGKAEEVTNNTYDDDVIAANRAKLXQKLASKTKK 712
K ESK+ + E V N TY+ DV A ++ K ++L S+ K
Sbjct: 483 KEAESKHQDANEPEPVKNVTYEPDVAAMDKKKKRRELKSRLNK 525
>Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 584 KIVESKNLTNGKAEEVTNNTYDDDVIAANRAKLXQKLASKTKK 712
K ESK+ + E V N TY+ DV A ++ K ++L S+ K
Sbjct: 483 KEAESKHQDANEPEPVKNVTYEPDVAAMDKKKKRRELKSRLNK 525
>Z73102-17|CAA97418.2| 375|Caenorhabditis elegans Hypothetical
protein B0035.16 protein.
Length = 375
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 320 LSYVDKFLNDVHLEFRDKYKNELQTGPCIVDFNFKTTFD 436
+++V ++ NDV L+F + YKN T P I D N FD
Sbjct: 69 VNFVKEYWNDVFLKFLENYKNGRTTVPDI-DCNQSIKFD 106
>U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical
protein C45G9.8 protein.
Length = 465
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/94 (27%), Positives = 35/94 (37%)
Frame = +2
Query: 434 DKVLKECEIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKGKKTVKIVESKNLTN 613
D VL EC + S +P T S KKT + +K KKT K S +T
Sbjct: 85 DSVLTECATMSTSTHVMPNSSSTISKSATEKKTKTGSKKVTRSKKSKKT-KRRSSTTVTT 143
Query: 614 GKAEEVTNNTYDDDVIAANRAKLXQKLASKTKKE 715
T D D + ++ K K +KE
Sbjct: 144 TTISNSKPVTPDKDKDSKDQRKQRTKRKDPFEKE 177
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 467 KSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKGKKTVKIVESKNLTNGKAEEVTNNTY 646
K AK+ +T ED QK + + + G+E K + E ++ +G +E+
Sbjct: 857 KEAAKVKVDAKTLEDKQKIVEELEKKRDELGEEAAKVKARQAEIQSKLDGIFKELVQCHR 916
Query: 647 DD-DVIAANRAKLXQKLASKT 706
D+ R KL + +A +T
Sbjct: 917 DEAKESLQKRQKLEKDIAKET 937
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 411 STIQGPVWSSFLYLSLNSKWTSLRNLSTYDNWSMRWY 301
+TIQ +W+S LS++S+ ++S NW++ W+
Sbjct: 118 NTIQ-LIWNSIGNLSIHSEQIRWNDVSDISNWNIEWF 153
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/88 (23%), Positives = 43/88 (48%)
Frame = +2
Query: 455 EIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKGKKTVKIVESKNLTNGKAEEVT 634
EI P + + + +S+ + S + + +E KK K+ + KN+ +V+
Sbjct: 366 EISDNEDVSKPSCSTSKKTTNRSRDSSESDNDSRDNELQKKKRKM-KRKNVPKTDGSDVS 424
Query: 635 NNTYDDDVIAANRAKLXQKLASKTKKEP 718
N ++D+D A+ + KL ++KK+P
Sbjct: 425 NESFDED---ASGEVVATKLIKESKKKP 449
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 413 FNFKTTFDKVLKECEIWAKSQAKIPKQMRTFEDS 514
F++ DKV KE + + K ++ KQ+ F++S
Sbjct: 291 FHYMNQLDKVKKERDCYRKELSRCKKQLEAFQNS 324
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 413 FNFKTTFDKVLKECEIWAKSQAKIPKQMRTFEDS 514
F++ DKV KE + + K ++ KQ+ F++S
Sbjct: 226 FHYMNQLDKVKKERDCYRKELSRCKKQLEAFQNS 259
>U80837-7|AAB37907.1| 760|Caenorhabditis elegans Hypothetical
protein F07E5.8 protein.
Length = 760
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -3
Query: 411 STIQGPVWSSFLYLSLNSKWTSLRNLSTYDNWSMRWY 301
+TIQ +W+S LS++S+ +++ NW++ W+
Sbjct: 92 NTIQ-LIWNSISNLSMHSENIRWNDIADISNWNIEWF 127
>U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical
protein F39B3.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 654 SSSYVLFVTSSALPFVRFL---LSTILTVFFPFSSPLRSIIDATVFL 523
S++++ F+ AL F++ L L+ T FF F+ + +++ ++FL
Sbjct: 10 STTFIAFIFDWALYFIQMLSHLLNGYFTAFFVFTGIILNLLSVSIFL 56
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/82 (23%), Positives = 42/82 (51%)
Frame = +2
Query: 437 KVLKECEIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKGKKTVKIVESKNLTNG 616
K++++ E K Q K + + ++++K ++ A +E EK K+ K E + +
Sbjct: 134 KIIEDAEKRKKEQEKREIENK-IKEARKKREQEARRLEEV--EKLKEQKK-AEKRKMKEA 189
Query: 617 KAEEVTNNTYDDDVIAANRAKL 682
+E ++D+D ++ RAK+
Sbjct: 190 LEKEEEEESFDEDEVSEKRAKI 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,419,290
Number of Sequences: 27780
Number of extensions: 312798
Number of successful extensions: 1194
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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