Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_H05
         (795 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 273 FQRYQHRIVLILQTNGCRTKFHSFHCILHLM 181
           ++ + HR  L    N C+  ++ FH  L LM
Sbjct: 126 YEDFWHRYTLSFIENYCQFLYNCFHSTLLLM 156


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 267 VETRCERIVRISEENYSY**TYWNFYIRSYCR 362
           +  RC++I  I     +   T W  Y+R YC+
Sbjct: 37  ISPRCDKISAICFLLSTILGTCWIIYVRIYCK 68


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 16  LVCLYGKLYFSFAATLILSKLI 81
           L C+  K   S AATL+L+K I
Sbjct: 256 LYCIIAKNLMSNAATLVLNKHI 277


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 450 DETSNGHWSIMRISVIETLCA 388
           D+ S+ +W+++ I+V   +CA
Sbjct: 915 DQWSSFYWNLLPIAVFILVCA 935


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 450 DETSNGHWSIMRISVIETLCA 388
           D+ S+ +W+++ I+V   +CA
Sbjct: 915 DQWSSFYWNLLPIAVFILVCA 935


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,012
Number of Sequences: 336
Number of extensions: 4077
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)