Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_H05
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 261 7e-71
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 155 9e-39
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 129 4e-31
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 118 7e-28
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 114 1e-26
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 109 3e-25
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 105 6e-24
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 39 0.001
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 38 0.002
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 29 0.77
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 27 2.3
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 4.1
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 5.4
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 26 5.4
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 26 5.4
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 26 7.1
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 261 bits (640), Expect = 7e-71
Identities = 123/216 (56%), Positives = 159/216 (73%)
Frame = +1
Query: 124 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ 303
MFRNQYD D T WSPQGRLHQVEYA+EA+K GSAT+GL +K +AVL+ALKR ELS+YQ
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 304 KKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICT 483
KK+I ID+HIGI+I+GL DAR+LS YM+ E L+ + P+PV RL+S V K QI T
Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINT 120
Query: 484 QRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHLNTFM 663
Q Y +RP GVG LV GYD+ GPH+ + PS + ++G+RSQSARTY+E++L+TF
Sbjct: 121 QEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFP 180
Query: 664 DCDLQELVXHGLRALRDTLPNEVDLNTKNVSICIVG 771
D +EL+ LRALRDTL + +L +NVSI ++G
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIG 216
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 155 bits (375), Expect = 9e-39
Identities = 92/223 (41%), Positives = 129/223 (57%), Gaps = 8/223 (3%)
Frame = +1
Query: 124 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SA 297
M R++YD V +SP+GRL QVEYA+EA+KLGS IG+K KD VL KR S L S
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESH 62
Query: 298 YQKKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGN---- 465
+K+ ID HIG +ISGLTADAR + + R + NHR+++D P + S+ +
Sbjct: 63 SVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALR 122
Query: 466 --KMQICTQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYL 639
+ + +R RP GV LL+AG D+ GP +Y + PS YF A AIG+ S+ A++ L
Sbjct: 123 FGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSEL 182
Query: 640 EKHLNTFMDCDLQELVXHGLRALRDTLPNEVDLNTKNVSICIV 768
K + D L+E L+ LR + E L++KNV + V
Sbjct: 183 VKEFH--KDMTLEEAEVLILKVLRQVM--EEKLDSKNVQLAKV 221
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 129 bits (312), Expect = 4e-31
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 3/215 (1%)
Frame = +1
Query: 133 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELS--AYQK 306
++Y +T +SP G+L Q+EYA+ AV G ++G+K D VL K+ SEL+ A +
Sbjct: 3 DKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLE 62
Query: 307 KIIPIDEHIGISISGLTADARML-SRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICT 483
K+ I IG+ SG+ D R+L + + ++ ++ P L+ + + MQ T
Sbjct: 63 KVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQEST 122
Query: 484 QRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHLNTFM 663
Q RP GV LLVAG D++GP +YQ PS YF +A AIG S +A+T+LEK N
Sbjct: 123 QSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND-- 180
Query: 664 DCDLQELVXHGLRALRDTLPNEVDLNTKNVSICIV 768
+ +L + V + AL++T E +L N+ I +V
Sbjct: 181 ELELDDAVHTAILALKETF--EGELTEDNIEIAVV 213
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 118 bits (285), Expect = 7e-28
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 4/174 (2%)
Frame = +1
Query: 139 YDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ--KKI 312
YD ++V+SP GRL QVEY EAV+ G+ I L+ + V+ ++ V +L +KI
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 313 IPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 492
+D H+ ++ +GL ADAR+L R E NH+ + P+ + L V Q TQ
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 493 DKRPLGVGLLVAGYD--DQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKH 648
RP GV L+AG+D D P +YQT P+ Y +A AIG S++AR YLEK+
Sbjct: 124 GVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKN 177
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 114 bits (275), Expect = 1e-26
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 5/223 (2%)
Frame = +1
Query: 139 YDSDVTVWSPQGRLHQVEYAMEAVK-LGSATIGLKNKDYAVLIALKRAVSEL--SAYQKK 309
+D +TV+SP+GRL+QVEYA +A G ++G+ K+ A +I+ K+ +L ++ K
Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKH 66
Query: 310 IIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQR 489
+ PI + IG ++G ADAR R+E Y + PMP L + N Q+ TQR
Sbjct: 67 VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQR 126
Query: 490 YDKRPLGVGLLVAGYDDQ-GPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHL-NTFM 663
RPLGV + + DD+ GP +++ P+ Y +A + G + +LEK +
Sbjct: 127 AAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGI 186
Query: 664 DCDLQELVXHGLRALRDTLPNEVDLNTKNVSICIVGPXTPLRI 792
+L + V G++AL +L D + + I +V P R+
Sbjct: 187 PSNLTDTVETGIQALMSSL--STDFKSTELQIGVVEDDKPFRV 227
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 109 bits (263), Expect = 3e-25
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Frame = +1
Query: 139 YDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ---KK 309
YDS T++SP+GRL+QVEYA+EA+ +G+ KD VL A K+ S+L + +K
Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEK 64
Query: 310 IIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQR 489
+ I +++ +++GLTADA +L Y R + + + MP +L+ V + Q TQ
Sbjct: 65 LYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQY 124
Query: 490 YDKRPLGVGLLVAGYDD-QGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHLNTFMD 666
RP GV L AG+D +G ++Q+ PS NY +A +IG S S ++ + + D
Sbjct: 125 GGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKD--D 182
Query: 667 CDLQELVXHGLRALRDTL 720
+L E ++ L TL
Sbjct: 183 INLDEASAMAVKFLSKTL 200
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 105 bits (253), Expect = 6e-24
Identities = 67/192 (34%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
Frame = +1
Query: 160 WSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SAYQKKIIPIDEHI 333
+SP GRL Q EYA +AV+ S IG+K +D +L K S+L +I +D HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 334 GISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGV 513
GI+ +G D + + + R E + R ++ +P+P + +GN +Q+ T RP GV
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
Query: 514 GLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHLNTFMDCDLQELVXH 693
VA YD +GPH+Y P+ Y+ A G Q AR LEK LN F +++ V
Sbjct: 134 MSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEK-LN-FSSLKMKDAVKE 191
Query: 694 GLRALRDTLPNE 729
R L T E
Sbjct: 192 AARILYATHDEE 203
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 38.7 bits (86), Expect = 0.001
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Frame = +1
Query: 208 VKLGSATIGLKNKDYAVLIALKRAVSELSAY-----QKKIIPIDEHIGISISGLTADARM 372
+++G+ L+ KD +L A R + AY K+ + ++I SG AD +
Sbjct: 21 IRMGTTITALRYKDGVILAADSRTT--MGAYIANRVTDKLTQLTDNIWCCRSGSAADTQT 78
Query: 373 LSRYMRTECLNHR--YSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGVGLLVAGYDDQ- 543
++ ++ +R + HD + ++S ++C Q +K L GL+VAGYD++
Sbjct: 79 VADLLKYYLSMYRIQFGHDPSVHTAATLAS-----EMCYQ--NKNMLSAGLIVAGYDEKT 131
Query: 544 GPHIYQTCPSANYFDCRAMAIGARSQSARTY 636
G +Y + P + +AIG S SA Y
Sbjct: 132 GGDVY-SIPLGGSLHKQPLAIGG-SGSAFIY 160
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 37.9 bits (84), Expect = 0.002
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Frame = +1
Query: 202 EAVKLGSATIGLKNKDYAVLIALKRAVS-ELSAYQ--KKIIPIDEHIGISISGLTADARM 372
+A G+ +G+ KD VL A RA + + A + KK+ I +I + +G AD
Sbjct: 30 KATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEF 89
Query: 373 LSRYMRTEC-LNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGVGLLVAGYDDQGP 549
++ + + L+ Y++ P R+++++ Q RY +G L++ GYD +GP
Sbjct: 90 VTSMISSNIELHSLYTNRKP----RVVTALTMLKQHLF-RYQGH-IGAYLVLGGYDCKGP 143
Query: 550 HIYQTCPSANYFDCRAMAIGARSQSARTYLE-KHLNTFMDCDLQELVXHGLRA 705
H++ + +A+G+ S +A + LE K+ + ELV + A
Sbjct: 144 HLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEA 196
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.77
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = +1
Query: 217 GSATIGLKNKDYAVLIALKRA-VSELSAYQ--KKIIPIDEHIGISISGLTADARMLSRYM 387
G+ T+ + + V+ RA L A Q KK+I I+ ++ +++G AD + +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 120
Query: 388 RTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGVGLLVAGYDDQGPHIY 558
EC H+ + + V S+ + T Y L +G ++AG G +Y
Sbjct: 121 GMECRLHQLRNKELISV----SAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALY 173
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 445 LISSVGNKMQICTQRYDK--RPLGVGLLVAGYDDQGPHIYQTCPSANYFDC 591
LIS + + + T ++ +PL +G Q PH TC A F C
Sbjct: 279 LISMISPRPNLSTHHFNLGFQPLSQQTSFSGSSTQNPHSSSTCKKAFCFQC 329
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 313 IPIDEHIGISISGLTADARMLSRYMRTE 396
+PID G I LT D+ ++ Y +TE
Sbjct: 231 VPIDPKFGEMIENLTPDSNIVHLYSKTE 258
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 222 CNHWSEE*GLCGVDSVETRCERIVRISEENY 314
C E+ LCG +S+ RC I +++ E +
Sbjct: 306 CTATVEKFCLCGKESIHARCSNISKVNTEPF 336
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 NYSY**TYWNFYIRSYCRCSYAESLHAHRVSQ-SPIFS*C 425
NYS YW+F++RS+ + +H H + + ++S C
Sbjct: 14 NYSKRKNYWHFWLRSFMSNNRKFLVHIHLIPHLNSLYSIC 53
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 26.2 bits (55), Expect = 5.4
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 433 PVGRLISSVGNKMQIC--TQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAI 606
P L+S ++Q C T + + L D PH+ S YF AM +
Sbjct: 118 PKNHLLSISRQELQKCFETNVIGQLAITSALFPLLLQDPNPHVVNIASSLAYFS--AMGV 175
Query: 607 GARSQSARTYLEKH 648
GA S S + H
Sbjct: 176 GAYSSSKAALVSLH 189
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 274 VSTLSTPHSPYSSDQWLQNQVSQLPL 197
++T P S Y S +W + QLPL
Sbjct: 236 IATSEQPISAYHSGEWFEKPSEQLPL 261
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,267,478
Number of Sequences: 5004
Number of extensions: 66301
Number of successful extensions: 196
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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