Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G24
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.77 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.77 
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   1.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   9.5  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 631 FMWHKAQVSFALFAIIVKYNDGNVCLKNMANLSRNWLSISS--FFLLTTASNILF 473
           F W  A+V +ALF ++  +      ++ +A    + L  +   FFL    +++LF
Sbjct: 48  FSWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLF 102


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 631 FMWHKAQVSFALFAIIVKYNDGNVCLKNMANLSRNWLSISS--FFLLTTASNILF 473
           F W  A+V +ALF ++  +      ++ +A    + L  +   FFL    +++LF
Sbjct: 48  FSWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLF 102


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 420 HGVMDATTAKGFTPEYTAN 476
           HG+ DAT A G    YT N
Sbjct: 270 HGLNDATAAPGEPGPYTVN 288


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 300 LLVTVFVLRWISTVLMSLLLAQGYI 374
           ++V VFVL W   ++  LL   G+I
Sbjct: 290 VIVFVFVLCWSPYIVFDLLQVYGHI 314


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 300 LLVTVFVLRWISTVLMSLLLAQGYI 374
           ++V+VF+L W   ++  LL   G I
Sbjct: 255 VIVSVFILCWSPYIIFDLLQVFGQI 279


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 495 VNKKNELILSQFLLRFAIFLRHTFPSLYFTIMAKRAN 605
           +  + +L++ +FL    I+L+H     + T    R+N
Sbjct: 17  IKMEEKLVVEKFLNSLQIYLQHNQIFGFVTFTCTRSN 53


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 311 CLRAEMDQYGINVTVVSPGXYKNSYINERFH 403
           CL  E  Q G N+   +     + Y++  FH
Sbjct: 89  CLLQEQQQAGANMAAAANLLRPHPYLSPLFH 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,110
Number of Sequences: 336
Number of extensions: 3799
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)