BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_G23
(787 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p pro... 206 2e-53
AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA... 206 2e-53
AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB... 186 4e-47
U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic ini... 41 0.002
BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p pro... 41 0.002
AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha k... 41 0.002
AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA... 41 0.002
BT011094-1|AAR82760.1| 870|Drosophila melanogaster RE31380p pro... 29 5.4
AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p pro... 29 7.2
AE013599-2784|AAF57625.2| 1022|Drosophila melanogaster CG15100-P... 29 7.2
AY061371-1|AAL28919.1| 244|Drosophila melanogaster LD29276p pro... 29 9.5
AE014297-1857|AAF55064.2| 244|Drosophila melanogaster CG8461-PA... 29 9.5
>AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p
protein.
Length = 522
Score = 206 bits (504), Expect = 2e-53
Identities = 101/129 (78%), Positives = 112/129 (86%), Gaps = 2/129 (1%)
Frame = +2
Query: 407 SCRKVKEEVSKLLALKAQLVTEDAGP--QKFTLKTPKGTRDYNPQQMTIRNNVLDKIITV 580
S K+ EEV++LLALKA L DA P QKFTLKTPKGTRDY PQQMT+R VLDKI+ V
Sbjct: 28 SKEKIDEEVARLLALKATL-GGDAAPTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQV 86
Query: 581 FRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGEILSLRYDLTVPLARYLXMNK 760
F+RHG E IDTPVFELK+VLTGKYGEDSKLIYDLKDQGGEILS+RYDLTVPLARYL MNK
Sbjct: 87 FKRHGGEAIDTPVFELKEVLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLARYLAMNK 146
Query: 761 ITTLKRYHI 787
I+++KRYHI
Sbjct: 147 ISSIKRYHI 155
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +1
Query: 148 MADSQEDLLLKIQEQGDLVRKLKAAKDSNER 240
M+D++E +L +I+ QGDLVR+LKAAK+S E+
Sbjct: 1 MSDTREQILEQIKVQGDLVRQLKAAKESKEK 31
>AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA,
isoform A protein.
Length = 522
Score = 206 bits (504), Expect = 2e-53
Identities = 101/129 (78%), Positives = 112/129 (86%), Gaps = 2/129 (1%)
Frame = +2
Query: 407 SCRKVKEEVSKLLALKAQLVTEDAGP--QKFTLKTPKGTRDYNPQQMTIRNNVLDKIITV 580
S K+ EEV++LLALKA L DA P QKFTLKTPKGTRDY PQQMT+R VLDKI+ V
Sbjct: 28 SKEKIDEEVARLLALKATL-GGDAAPTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQV 86
Query: 581 FRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGEILSLRYDLTVPLARYLXMNK 760
F+RHG E IDTPVFELK+VLTGKYGEDSKLIYDLKDQGGEILS+RYDLTVPLARYL MNK
Sbjct: 87 FKRHGGEAIDTPVFELKEVLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLARYLAMNK 146
Query: 761 ITTLKRYHI 787
I+++KRYHI
Sbjct: 147 ISSIKRYHI 155
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +1
Query: 148 MADSQEDLLLKIQEQGDLVRKLKAAKDSNER 240
M+D++E +L +I+ QGDLVR+LKAAK+S E+
Sbjct: 1 MSDTREQILEQIKVQGDLVRQLKAAKESKEK 31
>AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB,
isoform B protein.
Length = 563
Score = 186 bits (452), Expect = 4e-47
Identities = 99/145 (68%), Positives = 111/145 (76%), Gaps = 21/145 (14%)
Frame = +2
Query: 416 KVKEEVSKLLALKAQLVTEDAGP--QKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRR 589
++ EEV++LLALKA L DA P QKFTLKTPKGTRDY PQQMT+R VLDKI+ VF+R
Sbjct: 53 QIDEEVARLLALKATL-GGDAAPTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKR 111
Query: 590 HGAECIDTPVFELK-------------------DVLTGKYGEDSKLIYDLKDQGGEILSL 712
HG E IDTPVFELK +VLTGKYGEDSKLIYDLKDQGGEILS+
Sbjct: 112 HGGEAIDTPVFELKVSSPGSHWSGMILFKTMRIEVLTGKYGEDSKLIYDLKDQGGEILSM 171
Query: 713 RYDLTVPLARYLXMNKITTLKRYHI 787
RYDLTVPLARYL MNKI+++KRYHI
Sbjct: 172 RYDLTVPLARYLAMNKISSIKRYHI 196
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +1
Query: 148 MADSQEDLLLKIQEQGDLVRKLKAAKDSNERY 243
M+D++E +L +I+ QGDLVR+LKAAK+S E++
Sbjct: 1 MSDTREQILEQIKVQGDLVRQLKAAKESKEKH 32
>U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic
initiation factor eIF-2 alpha kinase protein.
Length = 1589
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 566 KIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGEILSLRYDLTVPLARY 745
K++ +FR+HGA +D+P+ ++ ++ L G ++ L DL AR+
Sbjct: 977 KVVNLFRKHGAIEVDSPLLSPLSARNSTANANANAVH-LMTHSGCVVVLPCDLRTQFARH 1035
Query: 746 LXMNKITTLKRY 781
+ MN + ++RY
Sbjct: 1036 VTMNSVNLIRRY 1047
>BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p
protein.
Length = 1312
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 566 KIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGEILSLRYDLTVPLARY 745
K++ +FR+HGA +D+P+ ++ ++ L G ++ L DL AR+
Sbjct: 700 KVVNLFRKHGAIEVDSPLLSPLSARNSTANANANAVH-LMTHSGCVVVLPCDLRTQFARH 758
Query: 746 LXMNKITTLKRY 781
+ MN + ++RY
Sbjct: 759 VTMNSVNLIRRY 770
>AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha kinase
protein.
Length = 1589
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 566 KIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGEILSLRYDLTVPLARY 745
K++ +FR+HGA +D+P+ ++ ++ L G ++ L DL AR+
Sbjct: 977 KVVNLFRKHGAIEVDSPLLSPLSARNSTANANANAVH-LMTHSGCVVVLPCDLRTQFARH 1035
Query: 746 LXMNKITTLKRY 781
+ MN + ++RY
Sbjct: 1036 VTMNSVNLIRRY 1047
>AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA
protein.
Length = 1589
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 566 KIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGEILSLRYDLTVPLARY 745
K++ +FR+HGA +D+P+ ++ ++ L G ++ L DL AR+
Sbjct: 977 KVVNLFRKHGAIEVDSPLLSPLSARNSTANANANAVH-LMTHSGCVVVLPCDLRTQFARH 1035
Query: 746 LXMNKITTLKRY 781
+ MN + ++RY
Sbjct: 1036 VTMNSVNLIRRY 1047
>BT011094-1|AAR82760.1| 870|Drosophila melanogaster RE31380p
protein.
Length = 870
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +2
Query: 341 VMARRLCNAVQRNCLTKNVTTSSCRKVKEEVSKLLA----LKAQLVTEDAGPQKFTLKTP 508
V+ +++ ++VQ L K VTT+ R + ++ +LLA L A L+ + + L+ P
Sbjct: 3 VVGQKMKHSVQARQLVKQVTTTKTRTLTMKLQQLLAAVCCLAAALILKTKAQENAMLQIP 62
Query: 509 KGTRD-YNPQQMTIRNNVL 562
+ YN R+N L
Sbjct: 63 PSLVECYNTSYFMNRDNRL 81
>AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p
protein.
Length = 1012
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 151 ADSQEDLLLKIQEQGDLVRKLKAA 222
+ S +DL IQEQGD VRKLK +
Sbjct: 879 SQSVQDLEKAIQEQGDKVRKLKGS 902
>AE013599-2784|AAF57625.2| 1022|Drosophila melanogaster CG15100-PA
protein.
Length = 1022
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 151 ADSQEDLLLKIQEQGDLVRKLKAA 222
+ S +DL IQEQGD VRKLK +
Sbjct: 889 SQSVQDLEKAIQEQGDKVRKLKGS 912
>AY061371-1|AAL28919.1| 244|Drosophila melanogaster LD29276p
protein.
Length = 244
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 362 NAVQRNCLTKNVTTSSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTP-KGTRDYNPQQ 538
NA++ + K ++ K+KEE+ + +A L ++ + PQK KT K P++
Sbjct: 23 NAIREDL--KGMSFEEIMKLKEELGAKVYKEAVLGSKSSRPQKPKAKTDLKRLNKNRPRE 80
Query: 539 MTIRNNV 559
MT R V
Sbjct: 81 MTTRRQV 87
>AE014297-1857|AAF55064.2| 244|Drosophila melanogaster CG8461-PA
protein.
Length = 244
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 362 NAVQRNCLTKNVTTSSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTP-KGTRDYNPQQ 538
NA++ + K ++ K+KEE+ + +A L ++ + PQK KT K P++
Sbjct: 23 NAIREDL--KGMSFEEIMKLKEELGAKVYKEAVLGSKSSRPQKPKAKTDLKRLNKNRPRE 80
Query: 539 MTIRNNV 559
MT R V
Sbjct: 81 MTTRRQV 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,435,653
Number of Sequences: 53049
Number of extensions: 690486
Number of successful extensions: 1549
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -