Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G23
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical pr...   157   8e-39
Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical pr...   154   8e-38
S68230-1|AAD14008.1|  514|Caenorhabditis elegans histidyl tRNA s...   152   3e-37
L13152-1|AAB38116.1|  525|Caenorhabditis elegans histidyl tRNA s...   152   3e-37
Z81015-6|CAE17725.1|  209|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical...    30   2.2  
U80450-5|AAB37830.1|  587|Caenorhabditis elegans Kinesin-like pr...    29   3.8  
AB032080-1|BAA92263.2|  587|Caenorhabditis elegans kinesin like ...    29   3.8  
AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical
           protein T11G6.1b protein.
          Length = 521

 Score =  157 bits (381), Expect = 8e-39
 Identities = 79/131 (60%), Positives = 96/131 (73%), Gaps = 4/131 (3%)
 Frame = +2

Query: 407 SCRKVKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKGTRDYNPQQMTIRNNVLDKIIT 577
           S R++KE+V+ L+  K +   E   P+K   F LKT KGTRDY P Q  +RN+VL  +  
Sbjct: 30  SGRRIKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTE 88

Query: 578 VFRRHGAECIDTPVFELKDVLTGKYGED-SKLIYDLKDQGGEILSLRYDLTVPLARYLXM 754
            F R+GAE IDTPVFEL+DVL GKYGE+  KL+YDL+DQGGE+LSLRYDLTVP ARYL M
Sbjct: 89  TFNRYGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARYLAM 148

Query: 755 NKITTLKRYHI 787
           NKIT + RY I
Sbjct: 149 NKITNITRYQI 159


>Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical
           protein T11G6.1a protein.
          Length = 520

 Score =  154 bits (373), Expect = 8e-38
 Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 4/127 (3%)
 Frame = +2

Query: 419 VKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRR 589
           +KE+V+ L+  K +   E   P+K   F LKT KGTRDY P Q  +RN+VL  +   F R
Sbjct: 33  IKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNR 91

Query: 590 HGAECIDTPVFELKDVLTGKYGED-SKLIYDLKDQGGEILSLRYDLTVPLARYLXMNKIT 766
           +GAE IDTPVFEL+DVL GKYGE+  KL+YDL+DQGGE+LSLRYDLTVP ARYL MNKIT
Sbjct: 92  YGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKIT 151

Query: 767 TLKRYHI 787
            + RY I
Sbjct: 152 NITRYQI 158


>S68230-1|AAD14008.1|  514|Caenorhabditis elegans histidyl tRNA
           synthetase protein.
          Length = 514

 Score =  152 bits (368), Expect = 3e-37
 Identities = 71/103 (68%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = +2

Query: 482 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 661
           P KF LKT KGTRDY P Q  +RN+VL  +   F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 6   PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 65

Query: 662 -SKLIYDLKDQGGEILSLRYDLTVPLARYLXMNKITTLKRYHI 787
             KL+YDL+DQGGE+LSLRYDLTVP ARYL MNKIT + RY I
Sbjct: 66  GGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQI 108


>L13152-1|AAB38116.1|  525|Caenorhabditis elegans histidyl tRNA
           synthetase protein.
          Length = 525

 Score =  152 bits (368), Expect = 3e-37
 Identities = 71/103 (68%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = +2

Query: 482 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 661
           P KF LKT KGTRDY P Q  +RN+VL  +   F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 17  PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 76

Query: 662 -SKLIYDLKDQGGEILSLRYDLTVPLARYLXMNKITTLKRYHI 787
             KL+YDL+DQGGE+LSLRYDLTVP ARYL MNKIT + RY I
Sbjct: 77  GGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQI 119


>Z81015-6|CAE17725.1|  209|Caenorhabditis elegans Hypothetical
           protein C11E4.8 protein.
          Length = 209

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 553 ITYCHLLWVVVSCSLWCFKS 494
           I YC ++W+V  CS W  +S
Sbjct: 42  IAYCEIMWIVSQCSFWTAES 61


>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
           protein Y48G9A.1 protein.
          Length = 1725

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 431 VSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECI 607
           + + L L A L  ++   Q   +  P G  D   +    RN + +  +   RRHGA C+
Sbjct: 300 IGQTLVLLAGLCRQEEAEQLIRIVAPDGLSD---RAQECRNELRNAAVETIRRHGAACM 355


>U80450-5|AAB37830.1|  587|Caenorhabditis elegans Kinesin-like
           protein protein 15 protein.
          Length = 587

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
 Frame = +2

Query: 389 KNVTTSSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDK 568
           K +  S    ++E++++L +  A+  T+ A  QK  ++   G  +   +++    + L  
Sbjct: 144 KPILPSKMALLEEKIAQLESAMAE-ATDFAEHQKSKIQILDGKLEGADRKLISLQDQLST 202

Query: 569 IITVFRRHGAECIDTPVF--ELKDVLTGKYGEDSKLIYDLKDQGGEI 703
           +  V +    EC D  V   +L+D+L  K  E  KL  D+ D  G+I
Sbjct: 203 LKEVNKAKVEECEDYRVHNNDLRDLLNEKEAELRKLHNDVVDLRGQI 249


>AB032080-1|BAA92263.2|  587|Caenorhabditis elegans kinesin like
           protein-15 protein.
          Length = 587

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
 Frame = +2

Query: 389 KNVTTSSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDK 568
           K +  S    ++E++++L +  A+  T+ A  QK  ++   G  +   +++    + L  
Sbjct: 144 KPILPSKMALLEEKIAQLESAMAE-ATDFAEHQKSKIQILDGKLEGADRKLISLQDQLST 202

Query: 569 IITVFRRHGAECIDTPVF--ELKDVLTGKYGEDSKLIYDLKDQGGEI 703
           +  V +    EC D  V   +L+D+L  K  E  KL  D+ D  G+I
Sbjct: 203 LKEVNKAKVEECEDYRVHNNDLRDLLNEKEAELRKLHNDVVDLRGQI 249


>AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical
           protein F35B3.7 protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +2

Query: 377 NCLTKNVTTSSC-RKVKEEVSKLLALKAQLVTEDAGPQKFTLKT---PKGTRDYNPQQMT 544
           NC  +N   SSC R V+EE ++L+    QL  E       +LK+   P  +   N ++  
Sbjct: 491 NCQRQNTAMSSCMRTVQEEKTRLMGKCIQLERELDNLHNVSLKSAGCPNCSVASNIEEKD 550

Query: 545 IRNNVLD 565
           +R  V D
Sbjct: 551 LRREVQD 557


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,702,367
Number of Sequences: 27780
Number of extensions: 378390
Number of successful extensions: 936
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)