Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G22
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    24   3.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.7  

>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +1

Query: 73  WKEIK*TENNDNRIYSSRRQHTKYINCHKQAKN 171
           W+E+   ++   + + S   HTK++   K  +N
Sbjct: 210 WRELMEKDDAVKQSFISTEDHTKFLQSRKNGEN 242


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = -2

Query: 337 CSIQRNSFFSVKAHFLCFF-LTHTFYL*KLISNLCPFPQTKRSSYNK*YKRNTISKS 170
           C   R+ +F   + +  +    +  YL K+  NLC +P +    YN   K     KS
Sbjct: 430 CQRSRSIYFDTHSLYCSYNRFRYRRYLSKIQRNLCRWPDSFWRFYNSKTKSTHTPKS 486


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,852
Number of Sequences: 2352
Number of extensions: 10209
Number of successful extensions: 230
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)