Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G22
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   6.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   8.2  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 170 TFRYGVPFILFVVG 211
           T+RYG  F+L+V G
Sbjct: 224 TYRYGFSFLLYVSG 237


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 412 FIYFPWSRASFVFPIINIQFLYFFICSIQRNSFFSVKAHFLCFFLTHT 269
           F+   WS +  VF +INI   +     I   +F SV +      L HT
Sbjct: 162 FLRTRWSISGTVFDLINIHLFHDASNFIAMETFPSVYSKTRRRALEHT 209


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -2

Query: 82  FLSIN-LNNHKNIIRYRTK 29
           F ++N LNNHK+I   R K
Sbjct: 411 FRTLNSLNNHKSIYHRRQK 429


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,202
Number of Sequences: 438
Number of extensions: 3182
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)