Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_G21
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024807-2|AAF59528.2| 431|Caenorhabditis elegans Hypothetical ... 32 0.57
Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 31 0.75
L16685-2|AAY43982.1| 262|Caenorhabditis elegans Hypothetical pr... 31 1.00
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 31 1.3
U80837-2|AAB37902.1| 315|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 28 7.0
Z73425-1|CAA97784.1| 97|Caenorhabditis elegans Hypothetical pr... 28 7.0
U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 28 7.0
>AC024807-2|AAF59528.2| 431|Caenorhabditis elegans Hypothetical
protein Y53G8AL.2 protein.
Length = 431
Score = 31.9 bits (69), Expect = 0.57
Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +1
Query: 76 FGSTGVIGLNAVEAALKKGLE-VRAFVRDPAKLPEH--LKDKVEIV--KGNVLEPDSVHE 240
FG++G +GL V K G + + + +DP + EH L + +++ +++ +S+ +
Sbjct: 65 FGASGFLGLPVVNKFAKNGSQIIIPYRQDPYYMREHKVLGELGQVLYFPFELMDEESIRK 124
Query: 241 AVEGTDAVVITLGTR 285
AV+ ++ V+ +GTR
Sbjct: 125 AVKYSNVVINLIGTR 139
>Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical
protein F49A5.7 protein.
Length = 411
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -2
Query: 266 TTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRPFLSAASTAFKPITP 87
+T ++P T T S + L ++ + S + +RT +R+ +P S AST +P+T
Sbjct: 80 STTNIPMTTFSTNEASSSTKLLSTSSTAEISST---TRTVSRSIKPETSTASTTIRPLTT 136
Query: 86 V---EPKNHDLLHFKFN 45
P N+ F FN
Sbjct: 137 TTTPAPSNNVGCTFGFN 153
>L16685-2|AAY43982.1| 262|Caenorhabditis elegans Hypothetical
protein ZC21.9 protein.
Length = 262
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 605 RNVPRSHLAMVLPGVFSGFTSIIISRLGSSV-KCGGNA 495
R+ +HLA V+PGVF+ ++ I++L SS C N+
Sbjct: 13 RDQRHAHLAQVVPGVFTSLVALSIAQLTSSCPSCNTNS 50
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -2
Query: 281 VPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRPFLS--AAST 108
VP T+ +VPST T S SRT + +T S + A T R P L +A T
Sbjct: 582 VPSTTTSVTVPSTQKATPSPSRTTKKSTTTTSTTATPRQA---TPTRNPLPLLQTMSAIT 638
Query: 107 AFKPITPVE 81
AF + +E
Sbjct: 639 AFPTLLSME 647
>U80837-2|AAB37902.1| 315|Caenorhabditis elegans Hypothetical
protein F07E5.2 protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -1
Query: 330 VFGSFR*IRSRRQVVPSPEGDDDSVCSFDGLMYRVWFENISFDYLDLVFKM 178
+F I R ++V E ++ + FDG VWF F +L++ M
Sbjct: 256 IFKGINYIEKRNRIVQCQEREEYRIERFDGTEALVWFNPNRFPFLEMTVMM 306
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 278 PRVMTTASVPSTASCTESGSRTFPLTISTLSLR 180
P+ TT ++PST + TES S + + +T +R
Sbjct: 132 PQTTTTTTIPSTTTMTESSSTSTTASPTTTRIR 164
>Z73425-1|CAA97784.1| 97|Caenorhabditis elegans Hypothetical
protein F12F6.2 protein.
Length = 97
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 263 TASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRPFLS 120
T S+PS SCT + R + + + C SF+ + ++ RPFLS
Sbjct: 45 TLSIPSV-SCTAAIDRKKEMMMKETMVVCVRSFSDALETSQRLRPFLS 91
>U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical
protein F09F7.3 protein.
Length = 1154
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 170 SFAGSRTNARTSRPFLSAASTAFKPITPVEPKNHDLLHFKFNCLL 36
++ S+ AR PF S T+ +TP PK H+ + F N ++
Sbjct: 288 AYVTSKVKARKFTPFGSLPGTSVSVLTP--PKEHEAVDFLSNSMI 330
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 278 PRVMTTASVPSTASCTESGSRTFPLTISTLSLR 180
P+ TT ++PST + TES S + + +T +R
Sbjct: 132 PQTTTTTTIPSTTTMTESSSTSTTASPTTTRIR 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,266,454
Number of Sequences: 27780
Number of extensions: 403676
Number of successful extensions: 1192
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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