Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_G20
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 60 2e-09
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 60 2e-09
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 56 3e-08
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 38 0.011
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 38 0.011
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 37 0.019
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.73
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.2
AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical ... 30 2.2
AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical... 29 5.1
AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical... 29 5.1
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 29 5.1
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 29 5.1
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 28 9.0
AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical ... 28 9.0
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 28 9.0
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 28 9.0
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 62.9 bits (146), Expect = 3e-10
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 2/225 (0%)
Frame = +2
Query: 83 YQPFGQTNRFQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLR 262
Y P + ++ E + V +G+ E + S + + C G A + CP L
Sbjct: 155 YDPTNKKCSWKGMIDECSQV--SGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLV 212
Query: 263 YNPNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNGVNG 439
+NP ++ C +P N + C E+S + PQ C GYF G R S F NG
Sbjct: 213 FNPAIS----SCDWPKNVMDCSEKS--EKPQN---CGEVDGYFSFG--RCSSSFSACTNG 261
Query: 440 VGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSD 619
+ CPDGL F+ + C++ V +CD E+ GF S L P
Sbjct: 262 IPIVMFCPDGLMFSEKNQMCDYEWNVDECDLES-SGF-MENYKASEALTPCTNMDNGLYA 319
Query: 620 NNCQKYFL-CIDGHPRVLYCGGESAFDDLTSTCVSADEVXACPAE 751
+C L C +G + C F++ + C + C E
Sbjct: 320 LDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKCCME 364
Score = 35.1 bits (77), Expect = 0.059
Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 7/139 (5%)
Frame = +2
Query: 158 CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP-NEVPC-LER 331
C E++ + + C NG CPDGL ++ C Y N C LE
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQM----CDYEWNVDECDLES 294
Query: 332 SSL----QPPQPTELCPHQF-GYFKLGDARNCSGFRNGVNGVGYDFVCPDGLAFNSETYR 496
S + + C + G + L +NG + F CP L FN +
Sbjct: 295 SGFMENYKASEALTPCTNMDNGLYALDCTPRVLSCQNGRENI---FECPPSLVFNENSLI 351
Query: 497 CEWPDEVADCDAEAFLGFR 553
C++P+ C E L R
Sbjct: 352 CDYPETSLKCCMEDALLIR 370
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 179 YPVSGSCD-RYIECINGTAEEKLCPDGLRYNPNVNF 283
YP+ G+C+ R++ C++G A CP+ L Y+ N+ F
Sbjct: 33 YPL-GACEPRFLACVSGEARYMDCPEDLVYHKNLEF 67
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 188 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 364
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 365 CPHQFGYFKLGDARNCSGFRNGVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 526
C GYF G S F NG CP GL F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 35.5 bits (78), Expect = 0.045
Identities = 52/226 (23%), Positives = 77/226 (34%), Gaps = 27/226 (11%)
Frame = +2
Query: 146 PTGQCRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNV-----NFDVYPCQYP 307
P C E + Y G C + C NG A CP GL+++ + +V CQ
Sbjct: 305 PQPTCEE--DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQET 362
Query: 308 NEVPCLERSSLQPPQPTELCPHQFGYFKLGDA------RNCSGFRNGVNGVGYD------ 451
+ E S Q + + + G+ C G NG++ +G
Sbjct: 363 SGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSC 422
Query: 452 -------FVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYY 610
F CP L FN ++ C++P C E + E PI+ G
Sbjct: 423 QNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG---L 477
Query: 611 RSDNNCQ-KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVXAC 742
SD C Y C G C +A F + CV + + C
Sbjct: 478 FSDGLCSATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 188 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 364
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 365 CPHQFGYFKLGDARNCSGFRNGVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 526
C GYF G S F NG CP GL F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 35.5 bits (78), Expect = 0.045
Identities = 52/226 (23%), Positives = 77/226 (34%), Gaps = 27/226 (11%)
Frame = +2
Query: 146 PTGQCRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNV-----NFDVYPCQYP 307
P C E + Y G C + C NG A CP GL+++ + +V CQ
Sbjct: 305 PQPTCEE--DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQET 362
Query: 308 NEVPCLERSSLQPPQPTELCPHQFGYFKLGDA------RNCSGFRNGVNGVGYD------ 451
+ E S Q + + + G+ C G NG++ +G
Sbjct: 363 SGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSC 422
Query: 452 -------FVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYY 610
F CP L FN ++ C++P C E + E PI+ G
Sbjct: 423 QNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG---L 477
Query: 611 RSDNNCQ-KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVXAC 742
SD C Y C G C +A F + CV + + C
Sbjct: 478 FSDGLCSATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Frame = +2
Query: 179 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVY-------------PCQYPNEVP 319
YP S +C ++ C++ + CP GL+Y+ ++ + P P
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAP 548
Query: 320 CLERSSLQPPQPTEL--CPHQFGYFKLGDARNCSGFRNGVNGVGYDFVCPDGLAFNSETY 493
+ ++ P T C G+F G +C F VNG+ Y+F CP+GL+F+++T
Sbjct: 549 TVTTTTRAPTTTTPAFKCTKD-GFF--GVPSDCLKFIRCVNGISYNFECPNGLSFHADTM 605
Query: 494 RCEWPD 511
C+ PD
Sbjct: 606 MCDRPD 611
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 53.2 bits (122), Expect = 2e-07
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 11/217 (5%)
Frame = +2
Query: 134 APVRPT---GQCRELNERYPVS-GSCD-RYIECINGTAEEKLCPDGLRYNPN-----VNF 283
AP +P G+C ++ S G C +Y+ C G ++ + C + ++ + V
Sbjct: 1097 APAQPKQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRE 1156
Query: 284 DVYPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNGVNGVGYDFV-C 460
V C P P +++ Q + G ++ + R+CS G ++ C
Sbjct: 1157 SVSACTVPKN-PSIKKYYTSNDQSAFCDGKEDGLYR--NERDCSAILQCFGGELFEHPSC 1213
Query: 461 PDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKYF 640
LAFN T +C++P +V+ C+ C E + NNC+ ++
Sbjct: 1214 QSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSEHG-----------SFIADANNCEVFY 1262
Query: 641 LCIDGHPRVLYCGGESAFDDLTSTCVSADEVXACPAE 751
C+ G V+ C + F+ L S C V +C +
Sbjct: 1263 RCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQ 1299
Score = 48.4 bits (110), Expect = 6e-06
Identities = 34/115 (29%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Frame = +2
Query: 197 CDRYIECINGTA-EEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPH 373
C ++C G E C L +N C YP +V E Q C
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTG----KCDYPQKVSGCENHG----QTNGECS- 1246
Query: 374 QFGYFKLGDARNCSGFRNGVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEA 538
+ G F + DA NC F V G CP G FN C+WP V C +A
Sbjct: 1247 EHGSF-IADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQA 1300
Score = 43.6 bits (98), Expect = 2e-04
Identities = 52/182 (28%), Positives = 71/182 (39%), Gaps = 24/182 (13%)
Frame = +2
Query: 269 PNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNGVNGVG 445
PN +++ Y QY N+VP S+ P G F LG ++ NG V
Sbjct: 665 PN-SYESYTTQYSSNDVP----STSAAPIGDRCSLDASGLFSLGCSQKYIQCSNGAAIVR 719
Query: 446 YDFVCPDGLAFNSETYRCEWPDEVADCDAEA-----------------FLGFRCPEVPIS 574
C + L FN T C + DEV +C ++ + G +VP +
Sbjct: 720 R---CGESLYFNEATQECTYRDEVPECGSQGSTSSPVITTPGQDQSSNYYGIPSDDVPST 776
Query: 575 RELGPPAGYR--YYRS---DNNC-QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVX 736
+ P G R Y S D C QKY C D V C G FD+ + +C DEV
Sbjct: 777 TQT--PVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVF 834
Query: 737 AC 742
C
Sbjct: 835 KC 836
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 629 QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVXACPAE 751
QKY C +G V CG F++ T C DEV C ++
Sbjct: 706 QKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 191 GSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP-CLERSSLQPP 349
G +YI+C NG A + C + L +N C Y +EVP C + S P
Sbjct: 703 GCSQKYIQCSNGAAIVRRCGESLYFNEATQ----ECTYRDEVPECGSQGSTSSP 752
Score = 31.9 bits (69), Expect = 0.55
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Frame = +2
Query: 194 SCDR-YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQ--PPQPTEL 364
+C R Y C+NG + C D + + + P E E + P +
Sbjct: 43 ACSREYSICVNGVRQAATCSDDSVFYED---ECVPVDESPECRVDENTEEDDTPYAEFDC 99
Query: 365 CPHQFGYFKLGDARNCSG-FRNGVNGVGYDFVCPDGLAFNSETYRC-EWPDEV 517
Q G + +G CS F + V G Y CPD L FN T C E DEV
Sbjct: 100 TSKQDGIYSIG----CSNQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEV 148
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +2
Query: 110 FQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDV 289
++ Q + P C L + G D + C N ++ CP G +N N
Sbjct: 177 YERQPSNEQPDSIDFDCNGLEDGNYADGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCD 236
Query: 290 YPC--QYPNEVPCLERSSLQPPQ 352
+ C P S++ PQ
Sbjct: 237 FQCTTDDPTTTVSYSTSTITTPQ 259
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 37.9 bits (84), Expect = 0.008
Identities = 33/116 (28%), Positives = 49/116 (42%)
Frame = +2
Query: 131 QAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 310
QAP P GQ +L+ S R ++C+ GT++ +C G +N Y C N
Sbjct: 91 QAPTCPNGQLPKLD-------SSLRPLQCLPGTSQHLIC--GANHNCFFTGLNYMCCPSN 141
Query: 311 EVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNGVNGVGYDFVCPDGLAF 478
E + S P+ T L PH AR+C G VG ++C + +F
Sbjct: 142 EPSIDNQPSCPYPKLTVLDPHGLPMKCSQIARSCPGENMHCADVGLGYICCEDPSF 197
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 419 FRNGVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 526
++N VNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 179 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 319
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 419 FRNGVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 526
++N VNG F+C +GL F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 179 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 319
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +2
Query: 206 YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELC-PHQFG 382
Y++C+ G + C GL YN C Y + V + + C G
Sbjct: 906 YVQCMQGRSLISSCAPGLFYNEKNGM----CAYKHTVDTCKIGKGSDIIDSNACFGKSDG 961
Query: 383 YFKLGDARNCSGFR-NGVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCP 559
Y+ G CS + + ++ CP+ L F+ E+ +C +P + +C L P
Sbjct: 962 YYSAG----CSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPP 1017
Query: 560 EVP 568
VP
Sbjct: 1018 AVP 1020
Score = 35.5 bits (78), Expect = 0.045
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 1/124 (0%)
Frame = +2
Query: 158 CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSS 337
C ++ Y +G Y CI+ + CP+ L+++ V+P
Sbjct: 955 CFGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDR 1014
Query: 338 LQPPQPTELCPHQFGYFKLGDARNCS-GFRNGVNGVGYDFVCPDGLAFNSETYRCEWPDE 514
P P++ C + L + CS + NG + C L +N +T C +
Sbjct: 1015 TPPAVPSDFCTIRSN--GLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKST 1072
Query: 515 VADC 526
DC
Sbjct: 1073 NKDC 1076
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 329 RSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNGVNGVGYDFVCPDGLAFNSETYRCE 502
++ L P P CP G + +G + S + VN V Y+ CP+GL F+ RCE
Sbjct: 33 KNVLNPKGPP--CPDGDGLYAVGCS---SKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 VRPTGQ-CRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYN 268
+ P G C + + Y V G +Y++C+N E+ CP+GL ++
Sbjct: 36 LNPKGPPCPDGDGLYAV-GCSSKYLQCVNNVEYEQSCPEGLYFD 78
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Frame = +2
Query: 341 QPPQPTELCPHQFGYFKLGDARNCSGFRNGV-----NGVGYDFVCPDGLAFNSETYRCEW 505
Q P T + F L D + SG V NG CP L FN C++
Sbjct: 560 QAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
Query: 506 PDEVADC 526
V DC
Sbjct: 620 STNVRDC 626
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = +2
Query: 122 YQEQAPVRPT-----GQCRELNERYPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNVNF 283
Y QAPV T C+ L + SG C + C NG CP L +NP V
Sbjct: 557 YTTQAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVG- 615
Query: 284 DVYPCQYPNEV 316
C Y V
Sbjct: 616 ---ECDYSTNV 623
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 407 NCSGFRNGVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 526
+C+ F +N CP GL ++ RC++ + V DC
Sbjct: 806 SCNNFETTINR------CPAGLFYSKLNNRCDYKEHVEDC 839
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 31.5 bits (68), Expect = 0.73
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 452 FVCPDGLAFNSETYRCEWPDEVADC 526
F+C +GL F+ E RC D++A+C
Sbjct: 128 FICENGLFFSPEQARCAPADQIAEC 152
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 179 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 319
Y + G +++ C G + CP L Y+P + C+Y VP
Sbjct: 69 YAIGGCSPQFLTCSGGISRIMDCPADLIYDPR----IVACEYSYNVP 111
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 317 PCLERSSLQPPQPTELCPHQFGYFKLGDARN------CSGFRNGVN 436
PCL +L PP E CP +FG FK D R C+ + +GVN
Sbjct: 154 PCLYGLTL-PPH-CEFCPSRFGAFKRADIRGRWAHAICALYTHGVN 197
>AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical
protein T27C4.2 protein.
Length = 643
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 140 VRPTGQCRELNERYPVSGSCDR---YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 310
V PT + VSG+ R +++ +GT P L +N Q +
Sbjct: 183 VSPTSTVYRMETDLSVSGNAIRNEPHVKVKSGTRHSTDSPINLEKAEEIN---KTNQVTS 239
Query: 311 EVPCLERSSLQPPQPTELCPHQ 376
P +++SS +PPQPT P +
Sbjct: 240 LAPKVQKSSTEPPQPTTTVPQE 261
>AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical
protein Y105E8A.7b protein.
Length = 840
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 623 NCQKYFLCIDGHPRVLYCGGESAF 694
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical
protein Y105E8A.7a protein.
Length = 906
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 623 NCQKYFLCIDGHPRVLYCGGESAF 694
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 155 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 322
QC +LN PV + I+ G +K CPDG + NP+ + + C E+ C
Sbjct: 443 QCLQLN---PVLSNKTVPIKATAGLCSDK-CPDGYQINPDDHRECRKCVGKCEIVC 494
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 155 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 322
QC +LN PV + I+ G +K CPDG + NP+ + + C E+ C
Sbjct: 440 QCLQLN---PVLSNKTVPIKATAGLCSDK-CPDGYQINPDDHRECRKCVGKCEIVC 491
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 620 NNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADE 730
N+C K+ CID HP +C F C DE
Sbjct: 1865 NDCNKHAECIDIHPDSHFCSCPDGFIGDGMICDDVDE 1901
>Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical
protein T23F11.6 protein.
Length = 187
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 542 LGFRCPEVPISRELGPPAGYRYYRSDNNCQKYFLC 646
L + CP S L PP +R + N+CQ ++C
Sbjct: 22 LSYACPPSLDSLNLPPPVIHRECLTRNSCQNGYIC 56
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 659 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRSGRSQN 480
D +C T C TC+I + G Q++ L + +R Q S H A +S +N
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS--LEN 240
Query: 479 *KP 471
KP
Sbjct: 241 LKP 243
>AF098497-2|AAC64978.1| 144|Caenorhabditis elegans Hypothetical
protein B0294.1 protein.
Length = 144
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 44 LTCFCAFVYTQTQYQPFGQ-TNRFQNQYQEQAPVRPTGQCRELNE 175
L+CF F Y Q FG N QNQ+++Q + G C+ + +
Sbjct: 57 LSCFAMF-YPSEQISSFGGIANIPQNQHRKQELAKADGTCQRMEK 100
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 659 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRSGRSQN 480
D +C T C TC+I + G Q++ L + +R Q S H A +S +N
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS--LEN 240
Query: 479 *KP 471
KP
Sbjct: 241 LKP 243
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 494 RCEWPDEVADCDAEAFLGFRCPEVPISRELG--PPA 595
RCE DEV D E G R + I+R LG PPA
Sbjct: 108 RCEEFDEVTDISKEYSTGTRKTKANIARALGLEPPA 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,096,299
Number of Sequences: 27780
Number of extensions: 441552
Number of successful extensions: 1464
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -