Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G18
         (524 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38; Eukaryo...    93   3e-18
UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; ...    93   4e-18
UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2; Caenor...    50   2e-05
UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved ...    44   0.003
UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6; ...    39   0.081
UniRef50_A1YWC3 Cluster: NADH-ubiquinone oxidoreductase chain 2;...    33   5.3  
UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;...    32   7.0  
UniRef50_A0PYY6 Cluster: Na+-driven multidrug efflux pump; n=1; ...    32   7.0  
UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.0  
UniRef50_Q27911 Cluster: Homeodomain protein PmHox1; n=2; Polyan...    32   9.3  

>UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38;
           Eukaryota|Rep: UPF0197 protein C11orf10 - Homo sapiens
           (Human)
          Length = 79

 Score = 93.5 bits (222), Expect = 3e-18
 Identities = 43/79 (54%), Positives = 52/79 (65%)
 Frame = +3

Query: 105 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 284
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 285 AXXXXXXXXXXXXWVGIYV 341
           +            WVGIYV
Sbjct: 61  SLFMGFGVLFLLLWVGIYV 79


>UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; Bos
           taurus|Rep: UPF0197 protein C11orf10 homolog - Bos
           taurus (Bovine)
          Length = 79

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 42/79 (53%), Positives = 52/79 (65%)
 Frame = +3

Query: 105 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 284
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 285 AXXXXXXXXXXXXWVGIYV 341
           +            WVGIY+
Sbjct: 61  SLFMGFGVLFLLLWVGIYI 79


>UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2;
           Caenorhabditis|Rep: UPF0197 protein Y57E12AM.1 -
           Caenorhabditis elegans
          Length = 79

 Score = 50.4 bits (115), Expect = 2e-05
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = +3

Query: 105 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 284
           ++I  M RYT+P+N A  P              A F + +VTSTK +R++ KEL ++  +
Sbjct: 1   MDISKMNRYTAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAATS 60

Query: 285 AXXXXXXXXXXXXWVGIYV 341
           +            WVGIYV
Sbjct: 61  SVFLGFGSVFLLLWVGIYV 79


>UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 148

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = +3

Query: 102 SLEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFV 218
           S  IESM RY SP+NPAV+PH             AWF V
Sbjct: 22  SAAIESMTRYVSPVNPAVYPHLTLILLTIGIFFMAWFLV 60


>UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6;
           Magnoliophyta|Rep: Putative uncharacterized protein -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 76

 Score = 38.7 bits (86), Expect = 0.081
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +3

Query: 135 SPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVAAXXXXXXXXX 314
           SPI  A++P              A FF+YE TS++ +R + KEL  S VA+         
Sbjct: 8   SPIPVALYPTLSVFTLAIGLVITAIFFIYEATSSRKNRSVGKELATSAVASVFLGFGSLF 67

Query: 315 XXXWVGIYV 341
                G+YV
Sbjct: 68  LLLASGVYV 76


>UniRef50_A1YWC3 Cluster: NADH-ubiquinone oxidoreductase chain 2;
           n=1; Cephalothrix rufifrons|Rep: NADH-ubiquinone
           oxidoreductase chain 2 - Cephalothrix rufifrons
          Length = 345

 Score = 32.7 bits (71), Expect = 5.3
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 229 QVLKPQEICSKSYFYHWWPPYFLVSVFCSCCYG*GFMCDINVRYNLSYE*CNTIPLLM 402
           Q L P  IC   +F  W+     +SVFCS   G G +  + +R  ++Y   N +  +M
Sbjct: 135 QKLAPLFICFWFFFDSWFFVVLFLSVFCSIIGGLGGINQVQIRVLMAYSSINHLGWMM 192


>UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;
           Apis mellifera|Rep: PREDICTED: similar to NAT9 - Apis
           mellifera
          Length = 267

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 149 GSFSTSNLFVARNRN-ILHGLVLRLRSYKY*SLKRYVQRVTFIIGGRLIFWFRYFVLVAM 325
           GSF T   F  +  N +     ++L SY +  LKRY     FI G  L  W+++  +   
Sbjct: 172 GSFYTGAEFTQQTYNRMFKNNTMQLESYNWAQLKRYAIYGCFIAGPLLHGWYKWLDMFYK 231

Query: 326 GRDLCVI 346
           G+ +  I
Sbjct: 232 GKTMKTI 238


>UniRef50_A0PYY6 Cluster: Na+-driven multidrug efflux pump; n=1;
           Clostridium novyi NT|Rep: Na+-driven multidrug efflux
           pump - Clostridium novyi (strain NT)
          Length = 443

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +3

Query: 21  SSEISEFVEFYWVLFSIVFRSKIAIK 98
           SS IS+F+ F+  LF I+F+SK+ +K
Sbjct: 197 SSVISQFIGFFITLFYIIFKSKVKLK 222


>UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 489

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 382 YIIHNLNYTLH*YHT*IPTHSNKNKIPKPENKAATNDKSNSLNISLE 242
           ++ H+    +H  +  +P H  +N+IPKP N    N   + LN+  +
Sbjct: 51  HVYHSYPILMHQIYDGLPEHEQQNQIPKPNNPEFKNIFLHKLNLGCQ 97


>UniRef50_Q27911 Cluster: Homeodomain protein PmHox1; n=2;
           Polyandrocarpa misakiensis|Rep: Homeodomain protein
           PmHox1 - Polyandrocarpa misakiensis
          Length = 167

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 304 PKPENKAATNDKSNSLNISLEALVLVTS*TKNQAVKNIPIPSNKKVRCGKTAGF 143
           P P+ + +TN+++N+ + +    +  T   KN   KN   PS K  +    AGF
Sbjct: 54  PAPKTEDSTNNENNNNSSAKTTSLEATKLEKNDTYKNYSSPSQKSQQSPTAAGF 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,545,208
Number of Sequences: 1657284
Number of extensions: 7839465
Number of successful extensions: 18212
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18206
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)