Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G15
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ022108-1|AAY51996.1|   66|Anopheles gambiae voltage-gated sodi...    24   2.8  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   2.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.5  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   8.6  

>DQ022108-1|AAY51996.1|   66|Anopheles gambiae voltage-gated sodium
           channel protein.
          Length = 66

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 381 FFHISIKIANSVVINLF 431
           FF  ++ I NSVV+NLF
Sbjct: 42  FFLATVVIGNSVVLNLF 58


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 196 KKEAKLQEIEAKEKVIRDAKLKEEKERA 279
           K  A ++E +  EK ++DA+  EE+++A
Sbjct: 338 KVAASVKETQEGEKKVKDAQEAEERKKA 365


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 190 LSKKEAKLQEIEAKEKVIRDAKLKEEKERASALEIKALEE 309
           L+ KE K +E+ AK+        KEE+++    E+K+L +
Sbjct: 365 LNLKEQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNK 404


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 130 FGRWSFLTVGVLYG 171
           F  WS LT+G+L G
Sbjct: 750 FWPWSVLTIGILVG 763


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,473
Number of Sequences: 2352
Number of extensions: 5951
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)