Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G14
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    27   0.19 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    27   0.25 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.3  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   9.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.4  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -3

Query: 780 HEEVGG---RSRPCXLQSYHQAILHNSP 706
           HEE+     R  P  L S HQA+LH++P
Sbjct: 324 HEELSAMVNRCHPLSLSSDHQAMLHHNP 351


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -2

Query: 172 REAWRHELKASATALYFHS*SVQQNHHSKFRPFCSTLLSELGNARYSDF 26
           R  W HEL+        H   +Q  H SKF P     L  L    + DF
Sbjct: 92  RPNWWHELETKFNP--HHEIKLQHLHQSKFNPHEEVKLQHLHQFPHHDF 138


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 501 LRCHLMDPNVEIDWRCKMSDLKFAAKTAHTAHQNT 397
           L  H+   + E  +RC + D +F+  ++ T H  T
Sbjct: 37  LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRT 71


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 501 LRCHLMDPNVEIDWRCKMSDLKFAAKTAHTAHQNT 397
           L  H+   + E  +RC + D +F+  ++ T H  T
Sbjct: 293 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRT 327


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 534 FVIDVCVHAM*LRCHLMDPNVEID 463
           F++  C H + L  +++  N++ID
Sbjct: 6   FLVLTCAHVVFLEEYVIPDNIDID 29



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 376 LVENPITCILVGGMCRLRGK 435
           L++N + C+L  G C   GK
Sbjct: 37  LLKNYVNCLLDKGRCTPEGK 56


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 564 RTFKLNRNRRPRVKLNYNTLTRPSDS 641
           + F  +R R P    + N  +RP DS
Sbjct: 363 QAFDFHREREPVADHHANLYSRPGDS 388


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 196 YEPRHQGWREAWRHEL 149
           Y    QGW+ + RH L
Sbjct: 120 YRENKQGWQNSIRHNL 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,342
Number of Sequences: 336
Number of extensions: 4110
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)