Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_G14
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024194-1|AAH24194.2| 340|Homo sapiens 3-hydroxymethyl-3-methy... 52 3e-06
AL590406-2|CAI40662.1| 241|Homo sapiens protein ( Human DNA seq... 52 3e-06
AK127587-1|BAC87045.1| 297|Homo sapiens protein ( Homo sapiens ... 52 3e-06
AF131827-1|AAD20054.1| 191|Homo sapiens Unknown protein. 52 3e-06
U49719-1|AAB19099.1| 305|Homo sapiens hydroxymethylglutaryl-CoA... 46 2e-04
L07033-1|AAA92733.1| 325|Homo sapiens hydroxymethylglutaryl-CoA... 46 2e-04
CR456884-1|CAG33165.1| 325|Homo sapiens HMGCL protein. 46 2e-04
BT009792-1|AAP88794.1| 325|Homo sapiens 3-hydroxymethyl-3-methy... 46 2e-04
BC010570-1|AAH10570.1| 325|Homo sapiens 3-hydroxymethyl-3-methy... 46 2e-04
AL031295-19|CAI23161.1| 300|Homo sapiens 3-hydroxymethyl-3-meth... 46 2e-04
>BC024194-1|AAH24194.2| 340|Homo sapiens
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
protein.
Length = 340
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEILXVAKP 803
++++++L MGCYE+SLGDTIGV T GS++R+L ++ P
Sbjct: 201 TEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPP 242
>AL590406-2|CAI40662.1| 241|Homo sapiens protein ( Human DNA
sequence from clone RP11-418P12 on chromosome 6. ).
Length = 241
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEILXVAKP 803
++++++L MGCYE+SLGDTIGV T GS++R+L ++ P
Sbjct: 102 TEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPP 143
>AK127587-1|BAC87045.1| 297|Homo sapiens protein ( Homo sapiens
cDNA FLJ45682 fis, clone FCBBF3001018, moderately
similar to Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4).
).
Length = 297
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEILXVAKP 803
++++++L MGCYE+SLGDTIGV T GS++R+L ++ P
Sbjct: 231 TEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPP 272
>AF131827-1|AAD20054.1| 191|Homo sapiens Unknown protein.
Length = 191
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEILXVAKP 803
++++++L MGCYE+SLGDTIGV T GS++R+L ++ P
Sbjct: 52 TEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPP 93
>U49719-1|AAB19099.1| 305|Homo sapiens hydroxymethylglutaryl-CoA
lyase protein.
Length = 305
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEIL 788
+++T++ +MGCYE+SLGDTIGV T G ++ +L ++
Sbjct: 166 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 202
>L07033-1|AAA92733.1| 325|Homo sapiens hydroxymethylglutaryl-CoA
lyase protein.
Length = 325
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEIL 788
+++T++ +MGCYE+SLGDTIGV T G ++ +L ++
Sbjct: 186 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 222
>CR456884-1|CAG33165.1| 325|Homo sapiens HMGCL protein.
Length = 325
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEIL 788
+++T++ +MGCYE+SLGDTIGV T G ++ +L ++
Sbjct: 186 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 222
>BT009792-1|AAP88794.1| 325|Homo sapiens
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase
(hydroxymethylglutaricaciduri protein.
Length = 325
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEIL 788
+++T++ +MGCYE+SLGDTIGV T G ++ +L ++
Sbjct: 186 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 222
>BC010570-1|AAH10570.1| 325|Homo sapiens
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase
(hydroxymethylglutaricaciduri protein.
Length = 325
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEIL 788
+++T++ +MGCYE+SLGDTIGV T G ++ +L ++
Sbjct: 186 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 222
>AL031295-19|CAI23161.1| 300|Homo sapiens
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyaseclass T
protein.
Length = 300
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 678 SQITEQLIAMGCYEVSLGDTIGVXTXGSVRRLLHEIL 788
+++T++ +MGCYE+SLGDTIGV T G ++ +L ++
Sbjct: 161 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,031,980
Number of Sequences: 237096
Number of extensions: 2387470
Number of successful extensions: 4943
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4943
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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