Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G11
         (512 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6TSN6 Cluster: Putative uncharacterized protein; n=1; ...    32   6.7  
UniRef50_UPI0000375478 Cluster: UPI0000375478 related cluster; n...    32   8.8  

>UniRef50_A6TSN6 Cluster: Putative uncharacterized protein; n=1;
           Alkaliphilus metalliredigens QYMF|Rep: Putative
           uncharacterized protein - Alkaliphilus metalliredigens
           QYMF
          Length = 748

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
 Frame = -1

Query: 320 FVTSNYLITVFFYLKQRKTFRG--AKSYLV*ATFFKLYRSAS*SFEKIFTTKKASSAIQT 147
           F+T+NY +T    +K R+  RG     Y+V      L+ SA       F  KK S   ++
Sbjct: 343 FITTNYFVTADGAMKLREFLRGHFTFKYIVNYNELSLFHSAKGQHNMNFLVKKESKTHES 402

Query: 146 E*T*LKFN*KHRTVDASTKIKRTFNYKDKCRALSETSL 33
               + FN + +  +AS  ++    YK K   +S+ SL
Sbjct: 403 M-VLISFN-QRKIEEAS--MRDALLYKKKIEGVSQLSL 436


>UniRef50_UPI0000375478 Cluster: UPI0000375478 related cluster; n=1;
           unknown|Rep: UPI0000375478 UniRef100 entry - unknown
          Length = 231

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 27/89 (30%), Positives = 45/89 (50%)
 Frame = -3

Query: 387 LTNIMTKIKNAKKNNFLTKH*SFRYVKLFNYRIFLFKTKKNISWGEKLFGLSDIF*TLQE 208
           ++  +T+ K   KN  L K   F+Y+++F+  I L+KT  +IS   KL  + +I    +E
Sbjct: 111 ISKTITRRKILIKNLSLLKPIVFKYLEIFDLFINLYKT-SSIS---KLEKVDEIISDFKE 166

Query: 207 CQLKF*KNIHNKKSFFSYSNGVNLIEVQL 121
            + KF KN+  K    S  + V    + L
Sbjct: 167 AEHKFSKNLWKKFENESSESEVEYFPISL 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,751,082
Number of Sequences: 1657284
Number of extensions: 4179683
Number of successful extensions: 8248
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8247
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)