Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G11
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.23 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 331 FC*KVVFLCIFYFC 372
           +C  ++ LCI+YFC
Sbjct: 289 YCALIILLCIYYFC 302



 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 331 FC*KVVFLCIFYF 369
           +C  ++ LCI+YF
Sbjct: 229 YCVLIILLCIYYF 241


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 177 CEYFFKTLTGTPVKFKKCRLNQI 245
           C+YF+  + G   +   C+L Q+
Sbjct: 192 CQYFYVCINGDTPRRSGCKLGQV 214


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 41  FRLTRDIYLCN*TSVLFWY*HQQ 109
           F   R++   N    LF+Y HQQ
Sbjct: 216 FEAAREVVAKNRRGELFYYMHQQ 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,683
Number of Sequences: 336
Number of extensions: 1240
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)