Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G10
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199...   142   3e-34
02_05_1315 + 35675285-35676688,35676816-35677255,35677341-35678784     29   3.8  
03_06_0158 + 32052426-32052529,32052645-32052702,32052847-320529...    29   5.1  
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729...    28   6.7  

>06_01_0268 +
           1989069-1989293,1989938-1990020,1990136-1990357,
           1990434-1990621,1990711-1990835,1990988-1991039,
           1991585-1991874,1992229-1992307,1992527-1992657
          Length = 464

 Score =  142 bits (343), Expect = 3e-34
 Identities = 70/147 (47%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
 Frame = +1

Query: 166 RVKGLTIVKPIVYGNIARYFGKKREEDGHTHQWTVYVKPYANEDMSTYIKKVHFKLHESY 345
           ++K + I  PIVYG I+ + GKK  E  ++H+WTVYV+   NED+S  +K+V F+LH S+
Sbjct: 78  KLKDVEISFPIVYGTISFWLGKKASEY-NSHKWTVYVRSATNEDLSVIVKRVVFQLHPSF 136

Query: 346 ANPNRIVTKPPYELMETGWGEFEIVIKLYFH-DPNERPLTLYHILKLFQSPVTEGTPPTF 522
            NP R+V +PP+EL E+GWGEFEI I LYFH D  E+ L L+H LKL+  P  +  P + 
Sbjct: 137 TNPTRVVEQPPFELSESGWGEFEIAITLYFHSDVCEKRLDLFHQLKLY--PEEDTGPQST 194

Query: 523 GHALVSESYEEIVFQEPTQLMQHLLKN 603
              +V E+Y+EIVF EPT+     ++N
Sbjct: 195 KKPVVVETYDEIVFPEPTEAFFQRVQN 221


>02_05_1315 + 35675285-35676688,35676816-35677255,35677341-35678784
          Length = 1095

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 416 SL*SYTFMIPMKDHLLYTTY*NYSNRQSLKVLPQHLDMLSSV 541
           SL S+    P++DHLL T    +++  SL V   H D LS++
Sbjct: 79  SLLSFPSDHPLRDHLLLTVTSAFASALSLPVSTDHADPLSAL 120


>03_06_0158 +
           32052426-32052529,32052645-32052702,32052847-32052983,
           32053824-32053899,32053965-32054017,32054415-32054896,
           32055097-32055184,32055482-32055665,32056443-32056640,
           32057351-32057534,32057982-32058109,32058236-32058317,
           32058444-32058496,32058625-32058700,32059253-32059314
          Length = 654

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 493 PVTEGTPPTFGHALVSESYEEIVFQEPTQLM 585
           PVT+G  P + + + S+ Y  ++FQEP+ L+
Sbjct: 589 PVTDGVGP-WDYPIFSDLYPNVMFQEPSGLI 618


>02_05_0226 +
           26971851-26972034,26972734-26972834,26972876-26972978,
           26973335-26973477,26973525-26973605,26973929-26974015,
           26974097-26974239,26974746-26974896,26974973-26975095,
           26975362-26975445,26975531-26975718,26976726-26976900,
           26977008-26977129,26977231-26977310,26977532-26977590,
           26977921-26978075,26978680-26978858,26980050-26980162,
           26980243-26980413,26980552-26980680,26980756-26980856,
           26980942-26981059,26981739-26981818,26983230-26983302,
           26983865-26983950,26984025-26984076,26984221-26984352,
           26984560-26984628,26984912-26985004,26985806-26985901,
           26986710-26986808,26986894-26986986,26987459-26987608,
           26988391-26988549
          Length = 1323

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 253 THQWTVYVKPYANEDMSTYIKKVHF-KLHESYANPNRIVTKPPYELMETGWGEFEIVI 423
           T +WTV + P  +ED S   + V F +  + ++  + ++  P Y ++      F IV+
Sbjct: 606 TSEWTVQLDPKFHEDASNMEQLVPFEECLQLHSTDSSVIKIPEYIMVTNNGRTFNIVV 663


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,649,462
Number of Sequences: 37544
Number of extensions: 394497
Number of successful extensions: 879
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)