Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G10
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77667-2|CAB01234.1|  211|Caenorhabditis elegans Hypothetical pr...   187   6e-48
AL132877-17|CAB60849.2|  269|Caenorhabditis elegans Hypothetical...    88   5e-18
U23515-2|AAK21459.1|  200|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    31   0.85 
U64605-8|AAF98602.1|  472|Caenorhabditis elegans Sorting nexin p...    29   4.5  
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    28   6.0  
AF045644-4|AAC02599.1|  211|Caenorhabditis elegans Onchocerca re...    28   6.0  

>Z77667-2|CAB01234.1|  211|Caenorhabditis elegans Hypothetical
           protein M04B2.3 protein.
          Length = 211

 Score =  187 bits (456), Expect = 6e-48
 Identities = 96/190 (50%), Positives = 121/190 (63%)
 Frame = +1

Query: 166 RVKGLTIVKPIVYGNIARYFGKKREEDGHTHQWTVYVKPYANEDMSTYIKKVHFKLHESY 345
           R+K   IVKPIVYGN A  FG KR+ D HTHQWTV++KPY  ED + +I+KV FKLHESY
Sbjct: 7   RMKKKNIVKPIVYGNTATPFGYKRDSDQHTHQWTVFLKPYLIEDPTKWIRKVQFKLHESY 66

Query: 346 ANPNRIVTKPPYELMETGWGEFEIVIKLYFHDPNERPLTLYHILKLFQSPVTEGTPPTFG 525
           A P R+V KPPYE+ ETGWGEFEI I++YF DPNE+P+T +H L+LFQ P  E   P+  
Sbjct: 67  AVPYRVVEKPPYEVTETGWGEFEIQIRIYFVDPNEKPITAFHYLRLFQ-PTIE--LPSGN 123

Query: 526 HALVSESYEEIVFQEPTQLMQHLLKNVRPITNGHWKHDTDFEEKKEKTLXRIIEAQTKVR 705
             +  E Y+EI+FQEPT  M   L+              D E+ K +T      AQ ++ 
Sbjct: 124 QIVCMEFYDEIIFQEPTVQMYKALQASDGKRPDKQAFLNDIEQVKTRTRELGEVAQKEIA 183

Query: 706 TEISXLKEKL 735
            EI  L+E L
Sbjct: 184 AEIEDLRESL 193


>AL132877-17|CAB60849.2|  269|Caenorhabditis elegans Hypothetical
           protein Y105E8B.7 protein.
          Length = 269

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 39/90 (43%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
 Frame = +1

Query: 232 KREEDGHTHQWTVYVKPYANEDMSTY-----IKKVHFKLHESYANPNRIVTKPPYELMET 396
           +  E+GHTH+WT++VKP  N D   +     I+KV F++HES+A P R VTKPP+++ ET
Sbjct: 17  ENNENGHTHKWTLFVKP-GNRDYDEFPDNKLIQKVKFEIHESFAQPVRFVTKPPFKITET 75

Query: 397 GWGEFEIVIKLYFHDPNERPLTLYHILKLF 486
           G+  F  ++ ++ + PNE+P T+ + L LF
Sbjct: 76  GFASFTTLVTIFLNLPNEKPRTIPYELTLF 105


>U23515-2|AAK21459.1|  200|Caenorhabditis elegans Hypothetical
           protein R144.10 protein.
          Length = 200

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +1

Query: 553 EIVFQEPTQLMQHLLKNVRPITNGHWKHDTDFEEKKEKTLXRIIEAQTKVRTEISXLKE 729
           EI+   PT+   H  K+ R +T    + D    E+ EK +  ++   T +R E++ LK+
Sbjct: 109 EIICHWPTEPKAHYKKSKRSMTEPD-EEDDRVLEQHEKEIAHLVAENTNLRQELAILKQ 166


>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 231 ETRRGWTHTSMDCLCKTLRKRGYVDLHQKSSLQTSRKLREPQ*DRDQAPL 380
           E   GW    +DC C  +  RG VD +   +L+ SR+L     D +Q  L
Sbjct: 518 EDYEGWKGRVIDCKCCIMDLRGRVDWYSVKTLKESRQLLPKFTDPEQHEL 567


>U64605-8|AAF98602.1|  472|Caenorhabditis elegans Sorting nexin
           protein 1 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 553 EIVFQEPTQLMQHLLKNVRPITNGHWKHDTDFEEKKEKTLXRIIEAQTKVRTEISXLKEK 732
           E   Q+  QL QH ++  + I     + D D ++  +K L   +E+     TE+  L EK
Sbjct: 403 EDTVQKMDQLEQHFIELSKAIREEVARFDADRKQDMKKMLVEYMESMIHTHTELLHLWEK 462


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -2

Query: 342 AFVKFEVNFFDVSRHILVCVRF----YINSPLMCVSILFAFLAEVTGYITVN 199
           AF+  +V    +  H+L C+R     +I+  ++C+ +  AF+   T Y+T N
Sbjct: 395 AFILLDVINMALCMHVLKCLRLPSLKWISILMLCMFVYDAFMVFGTPYMTTN 446


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -2

Query: 342 AFVKFEVNFFDVSRHILVCVRF----YINSPLMCVSILFAFLAEVTGYITVN 199
           AF+  +V    +  H+L C+R     +I+  ++C+ +  AF+   T Y+T N
Sbjct: 395 AFILLDVINMALCMHVLKCLRLPSLKWISILMLCMFVYDAFMVFGTPYMTTN 446


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -2

Query: 342 AFVKFEVNFFDVSRHILVCVRF----YINSPLMCVSILFAFLAEVTGYITVN 199
           AF+  +V    +  H+L C+R     +I+  ++C+ +  AF+   T Y+T N
Sbjct: 395 AFILLDVINMALCMHVLKCLRLPSLKWISILMLCMFVYDAFMVFGTPYMTTN 446


>AF045644-4|AAC02599.1|  211|Caenorhabditis elegans Onchocerca
           related antigen familyprotein 1 protein.
          Length = 211

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +1

Query: 550 EEIVFQEPTQLMQHLLKNVRPITNGHWKHDTDFEEKKEKTLXRIIEAQTKVRTEISXLKE 729
           + I F E  + +  L + V  +T  + K   +F+EKKEK +    + ++K+        E
Sbjct: 115 KSIPFSEKPEKIDALAQEV--LTGDNLKKFQEFKEKKEKEMQEYKDKESKLSAAAKVANE 172

Query: 730 KL 735
           KL
Sbjct: 173 KL 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,300,305
Number of Sequences: 27780
Number of extensions: 355674
Number of successful extensions: 863
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)