Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G08
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.67 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.67 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 614 LHEISREAYPGRLDPDCDGNHATQLLHKGFAGXFRDLRIG 733
           +HE + E +PGRL  +  G     LL  G  G FRD   G
Sbjct: 289 MHEDATERFPGRLAVN-TGQDPESLLING-KGQFRDPNTG 326


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 614 LHEISREAYPGRLDPDCDGNHATQLLHKGFAGXFRDLRIG 733
           +HE + E +PGRL  +  G     LL  G  G FRD   G
Sbjct: 289 MHEDATERFPGRLAVN-TGQDPESLLING-KGQFRDPNTG 326


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 396 VIGTVTWYLVFYTPFDV 446
           ++G VT YL+ +  FD+
Sbjct: 360 IVGAVTVYLIMFIQFDI 376


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 396 VIGTVTWYLVFYTPFDV 446
           ++G VT YL+ +  FD+
Sbjct: 185 IVGAVTVYLIMFIQFDI 201


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 396 VIGTVTWYLVFYTPFD 443
           ++G VT YLV +  FD
Sbjct: 370 IVGAVTTYLVIFIQFD 385


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 335 GSQWSSRRTHFGAVEEYTPISHRNCYMVLSFLHAFRCRL 451
           GS W ++   F  V+     S     +VLS +H ++ R+
Sbjct: 111 GSHWMNQDISFSRVKLTNTCSPPQGQLVLSSMHKYQPRI 149


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 613 ASRN*SRGLSGALGPRLRWKPCNPASTQRLRWXLP*SSY 729
           AS +     S +L P  RW  CN A + +    +P   Y
Sbjct: 350 ASNSSGDAQSTSLRPFSRWSLCNSARSNKYPTRVPHRPY 388


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 353 RRTHFGAVEEYTPISHRN 406
           R   +G +EEYT  +H N
Sbjct: 339 REKIYGVLEEYTRTTHPN 356


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 552 LYPNAYVIMVIVGTLKGNGAGFTKLVERLIRG 647
           L+ NAY  +V+  ++  +  G+T+ V    +G
Sbjct: 129 LFKNAYFQLVLSISVYSSSVGYTQYVRIAAKG 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,963
Number of Sequences: 336
Number of extensions: 4626
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)