BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_G08
(775 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001195-1|AAH01195.1| 299|Homo sapiens transmembrane protein 3... 150 5e-36
AK025981-1|BAB15307.1| 299|Homo sapiens protein ( Homo sapiens ... 150 5e-36
BC000049-1|AAH00049.1| 291|Homo sapiens transmembrane protein 3... 146 6e-35
AL627247-1|CAI12389.1| 291|Homo sapiens transmembrane protein 3... 146 6e-35
AL592488-1|CAH71457.1| 291|Homo sapiens transmembrane protein 3... 146 6e-35
AL592437-2|CAI39689.1| 291|Homo sapiens transmembrane protein 3... 146 6e-35
AK001355-1|BAA91645.1| 291|Homo sapiens protein ( Homo sapiens ... 146 6e-35
CR457258-1|CAG33539.1| 291|Homo sapiens FLJ10493 protein. 144 2e-34
AL627247-2|CAI12390.1| 237|Homo sapiens transmembrane protein 3... 109 8e-24
AL592488-2|CAH71458.1| 237|Homo sapiens transmembrane protein 3... 109 8e-24
AL592437-4|CAI39691.1| 237|Homo sapiens transmembrane protein 3... 109 8e-24
AL627247-4|CAI12392.1| 161|Homo sapiens transmembrane protein 3... 102 2e-21
AL592437-5|CAI39692.1| 161|Homo sapiens transmembrane protein 3... 102 2e-21
AL592437-3|CAI39690.1| 80|Homo sapiens transmembrane protein 3... 46 1e-04
>BC001195-1|AAH01195.1| 299|Homo sapiens transmembrane protein 38A
protein.
Length = 299
Score = 150 bits (364), Expect = 5e-36
Identities = 68/191 (35%), Positives = 114/191 (59%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA ++ ++P FD+++ ++ L ++ + GA SR+HP++ WL ML F ++
Sbjct: 11 ELALSFSRVPLFPVFDLSYFIVSILYLKYE--PGAVELSRRHPIASWLCAMLHCFGSYIL 68
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
A+ LLGEP++ N +++ + WYL+F+ P D+ YK FLPVK++ AMKE+ R +
Sbjct: 69 ADLLLGEPLIDYFSNNSSILLASAVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVR 128
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ G+ HA Y + + +M+ G +KG+G E+L+RG W P E + SF TK
Sbjct: 129 KIAVGIHHAHHHYHHGWFVMIATGWVKGSGVALMSNFEQLLRGVWKPETNEILHMSFPTK 188
Query: 699 ASLVXSVIFVL 731
ASL +++F L
Sbjct: 189 ASLYGAILFTL 199
>AK025981-1|BAB15307.1| 299|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22328 fis, clone HRC05632. ).
Length = 299
Score = 150 bits (364), Expect = 5e-36
Identities = 68/191 (35%), Positives = 114/191 (59%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA ++ ++P FD+++ ++ L ++ + GA SR+HP++ WL ML F ++
Sbjct: 11 ELALSFSRVPLFPVFDLSYFIVSILYLKYE--PGAVELSRRHPIASWLCAMLHCFGSYIL 68
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
A+ LLGEP++ N +++ + WYL+F+ P D+ YK FLPVK++ AMKE+ R +
Sbjct: 69 ADLLLGEPLIDYFSNNSSILLASAVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVR 128
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ G+ HA Y + + +M+ G +KG+G E+L+RG W P E + SF TK
Sbjct: 129 KIAVGIHHAHHHYHHGWFVMIATGWVKGSGVALMSNFEQLLRGVWKPETNEILHMSFPTK 188
Query: 699 ASLVXSVIFVL 731
ASL +++F L
Sbjct: 189 ASLYGAILFTL 199
>BC000049-1|AAH00049.1| 291|Homo sapiens transmembrane protein 38B
protein.
Length = 291
Score = 146 bits (355), Expect = 6e-35
Identities = 72/205 (35%), Positives = 118/205 (57%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA + M+P+FDIAH L+ +AV+ G+ A A+ K+P+S W + ML F GG++
Sbjct: 7 ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
+ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R
Sbjct: 65 SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTW 124
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K
Sbjct: 125 KIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAK 184
Query: 699 ASLVXSVIFVLDXKTDLISAPHALV 773
+L+ SVIF L + H L+
Sbjct: 185 VTLLGSVIFTFQHTQHLAISKHNLM 209
>AL627247-1|CAI12389.1| 291|Homo sapiens transmembrane protein 38B
protein.
Length = 291
Score = 146 bits (355), Expect = 6e-35
Identities = 72/205 (35%), Positives = 118/205 (57%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA + M+P+FDIAH L+ +AV+ G+ A A+ K+P+S W + ML F GG++
Sbjct: 7 ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
+ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R
Sbjct: 65 SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTW 124
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K
Sbjct: 125 KIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAK 184
Query: 699 ASLVXSVIFVLDXKTDLISAPHALV 773
+L+ SVIF L + H L+
Sbjct: 185 VTLLGSVIFTFQHTQHLAISKHNLM 209
>AL592488-1|CAH71457.1| 291|Homo sapiens transmembrane protein 38B
protein.
Length = 291
Score = 146 bits (355), Expect = 6e-35
Identities = 72/205 (35%), Positives = 118/205 (57%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA + M+P+FDIAH L+ +AV+ G+ A A+ K+P+S W + ML F GG++
Sbjct: 7 ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
+ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R
Sbjct: 65 SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTW 124
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K
Sbjct: 125 KIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAK 184
Query: 699 ASLVXSVIFVLDXKTDLISAPHALV 773
+L+ SVIF L + H L+
Sbjct: 185 VTLLGSVIFTFQHTQHLAISKHNLM 209
>AL592437-2|CAI39689.1| 291|Homo sapiens transmembrane protein 38B
protein.
Length = 291
Score = 146 bits (355), Expect = 6e-35
Identities = 72/205 (35%), Positives = 118/205 (57%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA + M+P+FDIAH L+ +AV+ G+ A A+ K+P+S W + ML F GG++
Sbjct: 7 ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
+ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R
Sbjct: 65 SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTW 124
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K
Sbjct: 125 KIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAK 184
Query: 699 ASLVXSVIFVLDXKTDLISAPHALV 773
+L+ SVIF L + H L+
Sbjct: 185 VTLLGSVIFTFQHTQHLAISKHNLM 209
>AK001355-1|BAA91645.1| 291|Homo sapiens protein ( Homo sapiens
cDNA FLJ10493 fis, clone NT2RP2000274. ).
Length = 291
Score = 146 bits (355), Expect = 6e-35
Identities = 72/205 (35%), Positives = 118/205 (57%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA + M+P+FDIAH L+ +AV+ G+ A A+ K+P+S W + ML F GG++
Sbjct: 7 ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
+ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R
Sbjct: 65 SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTW 124
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K
Sbjct: 125 KIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAK 184
Query: 699 ASLVXSVIFVLDXKTDLISAPHALV 773
+L+ SVIF L + H L+
Sbjct: 185 VTLLGSVIFTFQHTQHLAISKHNLM 209
>CR457258-1|CAG33539.1| 291|Homo sapiens FLJ10493 protein.
Length = 291
Score = 144 bits (350), Expect = 2e-34
Identities = 71/205 (34%), Positives = 117/205 (57%)
Frame = +3
Query: 159 DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 338
+LA + M+P+FDIAH L+ + V+ G+ A A+ K+P+S W + ML F GG++
Sbjct: 7 ELALAFSRTSMFPFFDIAHYLVSVMEVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64
Query: 339 ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAK 518
+ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R
Sbjct: 65 SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTW 124
Query: 519 KVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTK 698
K+ GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K
Sbjct: 125 KIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAK 184
Query: 699 ASLVXSVIFVLDXKTDLISAPHALV 773
+L+ SVIF L + H L+
Sbjct: 185 VTLLGSVIFTFQHTQHLAISKHNLM 209
>AL627247-2|CAI12390.1| 237|Homo sapiens transmembrane protein 38B
protein.
Length = 237
Score = 109 bits (263), Expect = 8e-24
Identities = 53/155 (34%), Positives = 87/155 (56%)
Frame = +3
Query: 309 MLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVA 488
ML F GG+++ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A
Sbjct: 1 MLHCFGGGILSCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLA 60
Query: 489 AAMKEIYRAKKVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAM 668
+ MKE+ R K+ GV+HA Y N +++M+ +G +G G ERL++G W P
Sbjct: 61 SGMKEVTRTWKIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGD 120
Query: 669 ETMQPSFYTKASLVXSVIFVLDXKTDLISAPHALV 773
E ++ S+ K +L+ SVIF L + H L+
Sbjct: 121 EWLKMSYPAKVTLLGSVIFTFQHTQHLAISKHNLM 155
>AL592488-2|CAH71458.1| 237|Homo sapiens transmembrane protein 38B
protein.
Length = 237
Score = 109 bits (263), Expect = 8e-24
Identities = 53/155 (34%), Positives = 87/155 (56%)
Frame = +3
Query: 309 MLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVA 488
ML F GG+++ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A
Sbjct: 1 MLHCFGGGILSCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLA 60
Query: 489 AAMKEIYRAKKVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAM 668
+ MKE+ R K+ GV+HA Y N +++M+ +G +G G ERL++G W P
Sbjct: 61 SGMKEVTRTWKIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGD 120
Query: 669 ETMQPSFYTKASLVXSVIFVLDXKTDLISAPHALV 773
E ++ S+ K +L+ SVIF L + H L+
Sbjct: 121 EWLKMSYPAKVTLLGSVIFTFQHTQHLAISKHNLM 155
>AL592437-4|CAI39691.1| 237|Homo sapiens transmembrane protein 38B
protein.
Length = 237
Score = 109 bits (263), Expect = 8e-24
Identities = 53/155 (34%), Positives = 87/155 (56%)
Frame = +3
Query: 309 MLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVA 488
ML F GG+++ LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A
Sbjct: 1 MLHCFGGGILSCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLA 60
Query: 489 AAMKEIYRAKKVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAM 668
+ MKE+ R K+ GV+HA Y N +++M+ +G +G G ERL++G W P
Sbjct: 61 SGMKEVTRTWKIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGD 120
Query: 669 ETMQPSFYTKASLVXSVIFVLDXKTDLISAPHALV 773
E ++ S+ K +L+ SVIF L + H L+
Sbjct: 121 EWLKMSYPAKVTLLGSVIFTFQHTQHLAISKHNLM 155
>AL627247-4|CAI12392.1| 161|Homo sapiens transmembrane protein 38B
protein.
Length = 161
Score = 102 bits (244), Expect = 2e-21
Identities = 48/142 (33%), Positives = 79/142 (55%)
Frame = +3
Query: 348 LLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAKKVY 527
LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R K+
Sbjct: 4 LLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTWKIV 63
Query: 528 DGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTKASL 707
GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K +L
Sbjct: 64 GGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAKVTL 123
Query: 708 VXSVIFVLDXKTDLISAPHALV 773
+ SVIF L + H L+
Sbjct: 124 LGSVIFTFQHTQHLAISKHNLM 145
>AL592437-5|CAI39692.1| 161|Homo sapiens transmembrane protein 38B
protein.
Length = 161
Score = 102 bits (244), Expect = 2e-21
Identities = 48/142 (33%), Positives = 79/142 (55%)
Frame = +3
Query: 348 LLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAKKVY 527
LL EP L L N +++ + WY+ F+ P D+ + +LPV+++A+ MKE+ R K+
Sbjct: 4 LLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTWKIV 63
Query: 528 DGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTKASL 707
GV+HA Y N +++M+ +G +G G ERL++G W P E ++ S+ K +L
Sbjct: 64 GGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAKVTL 123
Query: 708 VXSVIFVLDXKTDLISAPHALV 773
+ SVIF L + H L+
Sbjct: 124 LGSVIFTFQHTQHLAISKHNLM 145
>AL592437-3|CAI39690.1| 80|Homo sapiens transmembrane protein 38B
protein.
Length = 80
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +3
Query: 567 YVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTKASLVXSVIFVLDXKTD 746
+++M+ +G +G G ERL++G W P E ++ S+ K +L+ SVIF
Sbjct: 1 WIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAKVTLLGSVIFTFQHTQH 60
Query: 747 LISAPHALV 773
L + H L+
Sbjct: 61 LAISKHNLM 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,445,649
Number of Sequences: 237096
Number of extensions: 2837272
Number of successful extensions: 5687
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5679
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -