Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G08
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical...   237   6e-63
AL117195-8|CAB55030.1|  258|Caenorhabditis elegans Hypothetical ...   223   1e-58
U88174-6|AAB42272.1|  680|Caenorhabditis elegans Hypothetical pr...    32   0.40 
U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astaci...    29   4.9  
Z83110-4|CAB05526.1|   88|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U70853-6|ABQ13065.1|  185|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U70853-4|AAV34789.1|  195|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U70853-3|AAK77617.1|  246|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical
           protein Y57A10A.28 protein.
          Length = 313

 Score =  237 bits (580), Expect = 6e-63
 Identities = 102/213 (47%), Positives = 151/213 (70%)
 Frame = +3

Query: 135 TMDPESFLDLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTML 314
           ++D ++ +D    V KLK+YPYFD AH +L  L+VR DLG  A +FSRKHP SCWLS ML
Sbjct: 9   SIDHDTLIDAGGYVQKLKLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCML 68

Query: 315 VIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAA 494
           + FAG  ++  LLGEPI++PLK    +++G++ WYLVFY+PFDV +++A + PVK+  + 
Sbjct: 69  MSFAGSFLSCFLLGEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSV 128

Query: 495 MKEIYRAKKVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMET 674
           +KE+ R  K+  GV HA ++YP +Y++ ++VG  KG G+G  K+VE+L RG W PT  E 
Sbjct: 129 LKEVQRTHKIAAGVKHAVRIYPESYLVQILVGVAKGAGSGVVKIVEQLARGTWHPTNHEI 188

Query: 675 MQPSFYTKASLVXSVIFVLDXKTDLISAPHALV 773
           ++PSF TKA ++ S++F L+  +  ++APH LV
Sbjct: 189 LRPSFTTKACVIASIVFTLERHSMYVTAPHDLV 221


>AL117195-8|CAB55030.1|  258|Caenorhabditis elegans Hypothetical
           protein Y57A10A.10 protein.
          Length = 258

 Score =  223 bits (545), Expect = 1e-58
 Identities = 100/181 (55%), Positives = 130/181 (71%)
 Frame = +3

Query: 231 LAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTV 410
           + VR+DLGS A  FSRKHPLSCWLS+ML+ FA   +AN LLGEP++AP K    +++ T+
Sbjct: 3   IEVRDDLGSAASIFSRKHPLSCWLSSMLMCFADAFLANFLLGEPVIAPFKRHDDIILATI 62

Query: 411 TWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAKKVYDGVSHAAKLYPNAYVIMVIVG 590
            WYLVFY PFD  YK+AK  PVK V A MKE+ RA KV  GVSHAAKLYPN+Y++ V+VG
Sbjct: 63  IWYLVFYAPFDGIYKIAKITPVKCVLAVMKEVKRAYKVSHGVSHAAKLYPNSYIVQVLVG 122

Query: 591 TLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTKASLVXSVIFVLDXKTDLISAPHAL 770
           T KG G+G  + +E+L+RG W PT  E ++PSF TKA +V + +  L+     ++APH L
Sbjct: 123 TAKGAGSGIVRTLEQLVRGVWLPTHNELLRPSFATKACVVAASVLALEKSGTYLTAPHDL 182

Query: 771 V 773
           V
Sbjct: 183 V 183


>U88174-6|AAB42272.1|  680|Caenorhabditis elegans Hypothetical
           protein M01A10.1 protein.
          Length = 680

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 15/62 (24%), Positives = 34/62 (54%)
 Frame = +3

Query: 30  RPRLVACVRLLITLLSVFSCTIKLQYNGEIEQKTNTMDPESFLDLANQVIKLKMYPYFDI 209
           R RL    ++   ++ +F+C IKL+   +  +KT+ +    F D+++  +  +M   +D+
Sbjct: 2   RKRLTQAQKMFPQIIVIFNCQIKLKLIAKETKKTHDISGMFFQDVSSLTMNSRMVVPYDL 61

Query: 210 AH 215
           A+
Sbjct: 62  AN 63


>U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astacin
           protease protein 7 protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 462 KFLPVKVVAAAMKEIYRAKK-VYDGVSHAAKLYPNAYV 572
           K +PV+VV     +I   ++   +GVS AAKL+PNA +
Sbjct: 57  KHIPVEVVNDFKSDIRLPRRHKRNGVSRAAKLWPNARI 94


>Z83110-4|CAB05526.1|   88|Caenorhabditis elegans Hypothetical
           protein F57C2.4 protein.
          Length = 88

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 309 MLVIFAGGMVANGLLGEPI 365
           ++V  AGG+VA+G+ GEPI
Sbjct: 9   LVVALAGGIVAHGIKGEPI 27


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -2

Query: 396 LIGVYSSTAPKWVRLEDHWLPYRRRI--SLA*WTASMTVDASWKRPGH 259
           +   Y ST   W    D+WL  RR    S   WT    VD  W +PG+
Sbjct: 136 IAATYVSTG--WFPYMDNWLGLRRSCDNSTYIWTDGTPVDYLWWQPGY 181


>U70853-6|ABQ13065.1|  185|Caenorhabditis elegans Hypothetical
           protein M01H9.3d protein.
          Length = 185

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 385 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 242
           V F     GSP  P A+IP A     +   +D+ C     W P  +S+
Sbjct: 16  VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 59


>U70853-4|AAV34789.1|  195|Caenorhabditis elegans Hypothetical
           protein M01H9.3c protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 385 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 242
           V F     GSP  P A+IP A     +   +D+ C     W P  +S+
Sbjct: 26  VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 69


>U70853-3|AAK77617.1|  246|Caenorhabditis elegans Hypothetical
           protein M01H9.3a protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 385 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 242
           V F     GSP  P A+IP A     +   +D+ C     W P  +S+
Sbjct: 77  VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,111,204
Number of Sequences: 27780
Number of extensions: 427239
Number of successful extensions: 1054
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)