Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_G01
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   8.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -2

Query: 282 VSLHHYSSYLFSVFRFHMDFFSFVENNIHVFIKTHDVSFNPQIHV 148
           + LH ++S+L S   F  +   F+E      ++ +DV F   + V
Sbjct: 412 LGLHFHASWLKSKKEFKEELIKFIEE----MLQRNDVYFVTNLQV 452


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -2

Query: 282 VSLHHYSSYLFSVFRFHMDFFSFVENNIHVFIKTHDVSFNPQIHV 148
           + LH ++S+L S   F  +   F+E      ++ +DV F   + V
Sbjct: 419 LGLHFHASWLKSKKEFKEELIKFIEE----MLQRNDVYFVTNLQV 459


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
 Frame = +1

Query: 22   SQYKQKMAYKGPPKVQXVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHI-------V 180
            + + Q +   GP +      QP  L +  + NR R Q W+         G         V
Sbjct: 880  NNHDQGVPSAGPGEAGEYTKQPGMLAYYEICNRIRNQRWIVNRDTSGATGPFAYHGDQWV 939

Query: 181  GFDEYMNIVLDEAEEVHMK 237
            GF++ +  V D+AE +  K
Sbjct: 940  GFED-IKSVRDKAEYIKTK 957


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 5   NFSFTXVNTNKKWLIKAHRKF 67
           NF +     N+KW  K  +KF
Sbjct: 171 NFGYKQCVENRKWQNKVIQKF 191


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 5   NFSFTXVNTNKKWLIKAHRKF 67
           NF +     N+KW  K  +KF
Sbjct: 404 NFGYKQCVENRKWQNKVIQKF 424


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 5   NFSFTXVNTNKKWLIKAHRKF 67
           NF +     N+KW  K  +KF
Sbjct: 404 NFGYKQCVENRKWQNKVIQKF 424


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 31  KQKMAYKGPPKVQXVMVQPINLIFRYLQNRSRV 129
           ++K  Y   P+V  +MVQ I ++  +L    +V
Sbjct: 132 QEKPYYIADPEVDSLMVQAIQVLRFHLLELEKV 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,049
Number of Sequences: 336
Number of extensions: 2120
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)