Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F22
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   2.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.6  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   9.8  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = -2

Query: 559 NSLIAKYLFSPMLTFLKYL*PISCRNFLSYLYTSLEKTAPSLCNGDCLDNIN 404
           +S +   +F+     L +   +   N   Y+ +++EKT  S   G C +++N
Sbjct: 531 HSCVMPVIFAICFNILNWCMLVRSSNVCPYVSSTMEKTLDSQQAGSCGESLN 582


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 276 TRFDIKMIEPWNDANLQPPPVNTC 347
           TR+ ++++ PW D N  PP    C
Sbjct: 926 TRYALRLL-PWQDRNNLPPYAARC 948


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 108 EFNKSSIIFLTEEAM*FSYIYPRCAY 185
           ++N  ++I LTE  +  ++I P C Y
Sbjct: 228 KYNDIALIQLTERVIFTNFIRPACLY 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,989
Number of Sequences: 2352
Number of extensions: 14269
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)