Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F22
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical ...    28   6.0  
U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical
           protein Y46H3D.4 protein.
          Length = 517

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
 Frame = +3

Query: 339 NTCSSETSADVKDLRHICNNIILILSRQSPLHREGAVFSRLVYKYDKKFRHDIGYRYFKK 518
           N  +++   D+  L  I N    +    + LH + + F +L      K+ + +    F+ 
Sbjct: 202 NVYTTQPPIDLSPLSDIQNISGCLNFYSTDLH-DFSFFEKLENIKSNKYAN-VDINIFES 259

Query: 519 VNIGLKRYLAIKLLKDI-ENFVGILPEKNNDYLPTRQMLEYILVRLMTFSKIMVRIC 686
            N+   R  A+K ++   +NF+  + + ++D+  T   + + L   + FSKI  +IC
Sbjct: 260 YNLTRFRMPALKTIETTRDNFIINVEKVHDDFCFTPSEMLFFLKNEVIFSKIEAKIC 316


>Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical
           protein C25F9.1 protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = -1

Query: 416 GQYQYNIIADMP*IFDICTSFT*A--CINRWWLKISIIPRFYHLDVKPRF 273
           G  Q +   D P IFDI T F         WW  +  +P  YH   KP F
Sbjct: 191 GTIQTDFYKDFPEIFDIFTLFDGIKNLDEVWWRDLVALPALYH---KPNF 237


>AF101312-2|AAC69222.2|  475|Caenorhabditis elegans Hypothetical
           protein F56E10.3 protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -2

Query: 700 CFVHIHILTIILENVINLTKIYSSICRVGK*SLFFSGRIPTKFSMSFNSLIAKYLF 533
           CF+ ++I  I  EN+ + T  Y+SI      SLF     P  F  S    +  Y F
Sbjct: 170 CFLSVYISRIFQENLYSTTTTYTSI------SLFSLSLFPFTFPFSIPYFLFSYKF 219


>U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical
           protein F01G12.1 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 94  ESLHNNLRLHSIISLQIWLHW 32
           E  H+N+R H   ++++W HW
Sbjct: 104 EHKHHNMRSHDHHTMKMWFHW 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,227,371
Number of Sequences: 27780
Number of extensions: 334422
Number of successful extensions: 790
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)