Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F22
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.74 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.98 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.98 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.9  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   9.1  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 10/44 (22%), Positives = 24/44 (54%)
 Frame = +3

Query: 561 KDIENFVGILPEKNNDYLPTRQMLEYILVRLMTFSKIMVRICIC 692
           +D++ F+   P KN+ Y  T+ +L  +++  +    ++  I +C
Sbjct: 20  QDVDGFLQGFPGKNSPYTVTQAILIALVLGSIIVGTVIGNILVC 63


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 329 WLKISIIPRFYHLDVKPRFLFNIPNNSTTNY 237
           W     IP  Y  DV   F++N PN  + NY
Sbjct: 659 WAWNFTIPNMYFKDV---FIYNRPNEESMNY 686


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 329 WLKISIIPRFYHLDVKPRFLFNIPNNSTTNY 237
           W     IP  Y  DV   F++N PN  + NY
Sbjct: 659 WAWNFTIPNMYFKDV---FIYNRPNEESMNY 686


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 278 RFLFNIPNNSTTNYLS 231
           R++ N+PN S TN++S
Sbjct: 335 RWVANVPNGSVTNWVS 350


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 710 YCCLLCTYTYSHHNLRECH 654
           Y CLLC   +   NL + H
Sbjct: 62  YQCLLCQKAFDQKNLYQSH 80


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/32 (21%), Positives = 20/32 (62%)
 Frame = -2

Query: 127 IELLLNSHCFIESLHNNLRLHSIISLQIWLHW 32
           +++ + +   + SL +N+R+ S+ S ++ + W
Sbjct: 408 VDITVTTDASVPSLVSNVRITSVKSSELSISW 439


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
 Frame = -1

Query: 410 YQYNIIADMP*IFDI---CTSFT*ACINRWWLKISIIPRFYHLDVKPRFLFNIPNNS 249
           Y  N I  +P    +   C +F    +  W      IPRF H+     F   IP N+
Sbjct: 353 YNINYIEQIPVPVPVPIYCGNFPPRSMEPWISMQEQIPRFRHIGPSTPFPRFIPPNA 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,389
Number of Sequences: 438
Number of extensions: 4113
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)