Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_F21
(772 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit... 355 9e-97
UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4; Euk... 275 7e-73
UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, wh... 215 1e-54
UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit co... 206 5e-52
UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1; ... 195 9e-49
UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamo... 162 8e-39
UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lambl... 144 2e-33
UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit, p... 137 2e-31
UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2; ... 126 8e-28
UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n... 124 2e-27
UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n... 120 5e-26
UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n... 113 5e-24
UniRef50_UPI00015BB126 Cluster: protein translocase subunit secY... 111 1e-23
UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=... 109 6e-23
UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=... 109 1e-22
UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=... 109 1e-22
UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1; ... 103 5e-21
UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=... 102 9e-21
UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n... 102 1e-20
UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=... 99 1e-19
UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=... 99 1e-19
UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=... 97 4e-19
UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa... 97 6e-19
UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7; Sac... 96 1e-18
UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=... 95 2e-18
UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytic... 93 9e-18
UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=... 93 9e-18
UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=... 92 1e-17
UniRef50_A3GFV9 Cluster: Protein involved in co-translational pa... 91 2e-17
UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=... 90 6e-17
UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2; ... 87 5e-16
UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=... 82 1e-14
UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3; ... 79 2e-13
UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit co... 75 3e-12
UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:... 58 2e-07
UniRef50_O13579 Cluster: Putative uncharacterized protein YLR379... 51 3e-05
UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136, w... 45 0.002
UniRef50_A7N5J2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.84
UniRef50_Q839E4 Cluster: Preprotein translocase, SecY subunit; n... 36 1.1
UniRef50_A1RJU5 Cluster: Putative uncharacterized protein; n=7; ... 36 1.1
UniRef50_Q084M0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q8IR56 Cluster: CG32599-PA; n=3; Sophophora|Rep: CG3259... 35 1.9
UniRef50_Q6NGC5 Cluster: Phospho-N-acetylmuramoyl-pentapeptide-t... 35 1.9
UniRef50_Q55DH3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q4FR55 Cluster: Possible rhomboid family protein; n=3; ... 34 4.5
UniRef50_Q18CH6 Cluster: Preprotein translocase SecY subunit pre... 34 4.5
UniRef50_A1S616 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A0CEN2 Cluster: Chromosome undetermined scaffold_172, w... 34 4.5
UniRef50_Q6KI36 Cluster: Preprotein translocase secY subunit; n=... 33 5.9
UniRef50_O96185 Cluster: Putative uncharacterized protein PFB046... 33 5.9
UniRef50_O25879 Cluster: Preprotein translocase subunit secY; n=... 33 5.9
UniRef50_UPI00006CDD72 Cluster: hypothetical protein TTHERM_0029... 33 7.9
UniRef50_Q3W8J5 Cluster: Regulatory protein, TetR; n=1; Frankia ... 33 7.9
UniRef50_Q54RC2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q54R63 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q54F11 Cluster: Putative homeobox transcription factor;... 33 7.9
UniRef50_A5K4F3 Cluster: Putative uncharacterized protein; n=3; ... 33 7.9
UniRef50_P27148 Cluster: Preprotein translocase subunit secY; n=... 33 7.9
UniRef50_P38375 Cluster: Preprotein translocase subunit secY; n=... 33 7.9
>UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit
alpha isoform 2; n=176; Eukaryota|Rep: Protein transport
protein Sec61 subunit alpha isoform 2 - Homo sapiens
(Human)
Length = 476
Score = 355 bits (872), Expect = 9e-97
Identities = 169/206 (82%), Positives = 179/206 (86%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
MGIKFLEVIKPFC++LPEI KPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1 MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60
Query: 335 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 514
PFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61 PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 515 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXX 694
M+IT+GQAIVYVMTGMYG+P+E+GAG+CLLIIIQLFVA
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 695 XXXATNICETIVWKAFSPXTVNTGRG 772
ATNICETIVWKAFSP T+NTGRG
Sbjct: 181 LFIATNICETIVWKAFSPTTINTGRG 206
>UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4;
Eukaryota|Rep: Protein transporter, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 478
Score = 275 bits (675), Expect = 7e-73
Identities = 129/207 (62%), Positives = 157/207 (75%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
MG +FLE+++PF SILPE+ PE+K+ F K+ WTA+TL IFLVC Q+PL+GIMSSDS+D
Sbjct: 1 MGFRFLELVRPFMSILPEVTAPEKKVVFNHKIAWTAVTLLIFLVCSQVPLYGIMSSDSSD 60
Query: 335 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLF 511
P YW+R ILASNRGTLMELGI+PIVTSG+IMQLLAGA++I+V + K DRALF AQKLF
Sbjct: 61 PLYWLRAILASNRGTLMELGITPIVTSGMIMQLLAGAQLIDVDFSLKDDRALFGAAQKLF 120
Query: 512 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXX 691
M+I++GQA VYV+TG+YG PS +GAGVCLL+I+QL A
Sbjct: 121 AMIISLGQATVYVLTGLYGSPSSLGAGVCLLLILQLVSASLIVILLDELLTKGYGLGSGI 180
Query: 692 XXXXATNICETIVWKAFSPXTVNTGRG 772
ATNICE+IVWKAFSP TVNTGRG
Sbjct: 181 SLFIATNICESIVWKAFSPNTVNTGRG 207
>UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=11; Eukaryota|Rep: Chromosome
undetermined scaffold_28, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 474
Score = 215 bits (525), Expect = 1e-54
Identities = 105/205 (51%), Positives = 138/205 (67%), Gaps = 2/205 (0%)
Frame = +2
Query: 164 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 343
K L ++P +I+P++A+PER+I F+ + LWTAI ++L+C QIPL+GI S + DPFY
Sbjct: 6 KILNYMRPAMAIIPDVAEPERRILFKYRALWTAIATLLYLICSQIPLYGIYKSSAGDPFY 65
Query: 344 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMV 520
W+RVILASNRGTLMELGISP+VT+ +IMQLLAGAK+I+V K D+ L++GAQKL G++
Sbjct: 66 WMRVILASNRGTLMELGISPMVTASMIMQLLAGAKLIDVDQNVKEDKQLYSGAQKLLGIL 125
Query: 521 ITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL-FVAXXXXXXXXXXXXXXXXXXXXXXX 697
I G+A YV +GMYG+ ++GAG +LIIIQL F A
Sbjct: 126 IAFGEAFAYVWSGMYGDLDKLGAGNAILIIIQLVFSAIVMIMIDELLSKGYGIGNSGTSL 185
Query: 698 XXATNICETIVWKAFSPXTVNTGRG 772
A NICE I+WKAFSP T T G
Sbjct: 186 FIAINICENIMWKAFSPITHKTELG 210
>UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Preprotein translocase, SecY subunit
containing protein - Tetrahymena thermophila SB210
Length = 551
Score = 206 bits (503), Expect = 5e-52
Identities = 101/218 (46%), Positives = 143/218 (65%), Gaps = 4/218 (1%)
Frame = +2
Query: 113 VNILVRIVKSQ*IKMGI-KFLEVIKPFCSILPEIAKPERKI-QFREKVLWTAITLFIFLV 286
+ IL I K + IK + + LE++ P +++PE+ KP +KI FR + +WTAI + I+LV
Sbjct: 61 IKILQYIKKRKTIKQNMSRILEILAPAINLIPEVEKPIKKILPFRSRAMWTAIVILIYLV 120
Query: 287 CCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG- 463
QIPLFG++S+ ADPFYW+RVILASNRGT+MELGISP VT+G++MQLL GA+I+ +
Sbjct: 121 ASQIPLFGVVSNAGADPFYWLRVILASNRGTIMELGISPTVTAGMVMQLLVGAQILNIDQ 180
Query: 464 DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL-FVAXXXX 640
+ P R+L+ G+QKL G++I +A+ YV +GMYG+ ++G G LLI++QL F
Sbjct: 181 NDPVQRSLYEGSQKLLGLIIAFFEAVAYVWSGMYGDIEKVGYGNALLIVLQLTFAGIIVI 240
Query: 641 XXXXXXXXXXXXXXXXXXXXXATNICETIVWKAFSPXT 754
A NICETI+WK+FSP T
Sbjct: 241 LLDDLLSKGHGLGNSAISVFIAINICETIIWKSFSPIT 278
>UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 377
Score = 195 bits (476), Expect = 9e-49
Identities = 92/157 (58%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
Frame = +2
Query: 158 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 337
G + L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 338 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 514
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 515 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFV 625
++I +G+A+ YV++GMYG S + V LL + +F+
Sbjct: 124 ILIAIGEAVAYVLSGMYG--SNLPNVVNLLATVLVFL 158
>UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamoeba
histolytica HM-1:IMSS|Rep: Sec61 alpha subunit -
Entamoeba histolytica HM-1:IMSS
Length = 447
Score = 162 bits (394), Expect = 8e-39
Identities = 91/206 (44%), Positives = 121/206 (58%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
MG+ F VI+P S++P I +P +KI F+EK++WT ITL +FLVC QIPL G + D
Sbjct: 1 MGV-FFNVIRPIVSLIPTINEPTKKIGFKEKLMWTGITLLVFLVCSQIPLIGTDIVGN-D 58
Query: 335 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 514
PFYW+R+++ASNRG+LMELGISPIVT+ ++MQLL GAKII V + N ++++
Sbjct: 59 PFYWMRLVMASNRGSLMELGISPIVTASMVMQLLQGAKIISVD-------MDNQEERMY- 110
Query: 515 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXX 694
G+PSE+G C LI++QLFVA
Sbjct: 111 -----------------GDPSELGFFNCCLILLQLFVAGLIVLLLDELLSNGYGFGSAIS 153
Query: 695 XXXATNICETIVWKAFSPXTVNTGRG 772
ATNICE+IVW AFSP T + G G
Sbjct: 154 LFIATNICESIVWSAFSPLTTSVGTG 179
>UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_10951_12423 - Giardia lamblia
ATCC 50803
Length = 490
Score = 144 bits (349), Expect = 2e-33
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Frame = +2
Query: 152 KMGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSA 331
+M +L+V+ P+ +LP + K + ++F K L+T + L ++L Q+PL+G+ SS
Sbjct: 18 RMVATWLKVLDPWARMLPSVEKAPKTVRFTTKGLYTFLALIVYLTASQVPLYGLHSSIRK 77
Query: 332 DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKL 508
DP +W+R I A RG+LMELGI P +TS +++L +K++ + + +FN Q L
Sbjct: 78 DPLFWLRSIFAGQRGSLMELGIGPTITSSFFLKILISSKVLPFDKNNEVESQVFNRVQNL 137
Query: 509 FGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXX 688
G + T QA++YV+ G+YG S+IG + II QL ++
Sbjct: 138 IGFIFTFFQAVLYVLAGIYGSISQIGLFSAVAIIAQLTISSILVQVLDEMLENGWGIGSG 197
Query: 689 XXXXXATNICETIVWKAFSPXTVNTGRG 772
N+CE I+WK+FS ++ G G
Sbjct: 198 ISLFTTANVCENIIWKSFSFFRIDRGNG 225
>UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit,
putative; n=5; Trichomonas vaginalis G3|Rep: Preprotein
translocase, SecY subunit, putative - Trichomonas
vaginalis G3
Length = 484
Score = 137 bits (332), Expect = 2e-31
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
MG L+ I+P ++P + +P +K+ R+++ +T +L ++L+C +PL+G+ + D
Sbjct: 1 MGFDILKSIRPVLELMPNVPRPNKKVPIRKRLFYTFASLAVYLICTLVPLYGVQKTAGDD 60
Query: 335 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLF 511
P +R++ AS++ +LME GISPIVTSG+I+Q L +I + P+ ALF+ AQKL
Sbjct: 61 PMQHLRILTASSKYSLMEFGISPIVTSGMILQFLCSFGLINRNPSDPEASALFDAAQKLA 120
Query: 512 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXX 691
G+++T QA + +G YG EIG LI+ QL +
Sbjct: 121 GIIMTAFQAGNAIWSGEYGIRGEIGFVNAALIMTQLVSSAIVVILLDELCQNGYGIGSGI 180
Query: 692 XXXXATNICETIVWKAFSPXTVNTGRG 772
TNICE I+W+ FS + GRG
Sbjct: 181 SLFICTNICEMIMWRLFSFNHYSMGRG 207
>UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2;
Apansporoblastina|Rep: ER PROTEIN-TRANSLOCATION COMPLEX
- Encephalitozoon cuniculi
Length = 410
Score = 126 bits (303), Expect = 8e-28
Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Frame = +2
Query: 347 IRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMVI 523
+R ++ASNRGTLM+LG SP+VTS LIMQ L ++I++V + K D+ L N Q+L +++
Sbjct: 1 MRAMMASNRGTLMDLGTSPVVTSSLIMQFLTMSEILKVDWSIKEDKNLHNATQRLISLIM 60
Query: 524 TVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXXXXX 703
TVGQA+V V TG YG P +G CLL+++QL +
Sbjct: 61 TVGQALVQVYTGFYGSPKSLGTIYCLLLVVQLIFSGIIIILLDELLQKGYGLGNGVNLFI 120
Query: 704 ATNICETIVWKAFSPXTVNTGRG 772
A N+CE+I+WKAFSP + TGRG
Sbjct: 121 AANVCESIIWKAFSPKVLFTGRG 143
>UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n=1;
Thermofilum pendens Hrk 5|Rep: Preprotein translocase,
SecY subunit - Thermofilum pendens (strain Hrk 5)
Length = 476
Score = 124 bits (300), Expect = 2e-27
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 3/201 (1%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGI--MSSDS 328
MG+K E + LPEI KP RK E++LWTA+ L + V Q PL+GI + +
Sbjct: 1 MGLK--ESLDSVFRFLPEIEKPRRKPPLSERLLWTALVLVAYFVMGQTPLYGIPRQTQGT 58
Query: 329 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQK 505
++RV++AS RGTL+ELGI PIVTSG++ +LL G++I+ + TP+ R F G QK
Sbjct: 59 LGALEFLRVVMASKRGTLIELGIGPIVTSGIVWELLVGSRIVNLDLTTPEGRRTFAGLQK 118
Query: 506 LFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXX 685
L + +A Y++ G+YG ++ +++ +QLFVA
Sbjct: 119 LTAFLFAALEAAAYILGGVYGALTQQQQ---IIVFVQLFVASTFVILMNDMLEKGWGIGS 175
Query: 686 XXXXXXATNICETIVWKAFSP 748
A + + I W+ FSP
Sbjct: 176 AVSLFIAAGVAQQIFWELFSP 196
>UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n=1;
Staphylothermus marinus F1|Rep: Preprotein translocase,
SecY subunit - Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1)
Length = 476
Score = 120 bits (288), Expect = 5e-26
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 9/206 (4%)
Frame = +2
Query: 170 LEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWI 349
++++ +P + KP+ K E++LWTAI L ++++ PL+GI + +
Sbjct: 4 IDLMAKIADYIPTVEKPKAKPGLYERLLWTAIALIVYVIMANTPLYGISVTGGGQQILLV 63
Query: 350 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVIT 526
++I AS RGTLMELGI PIVT+GLIMQ+L GAK+I + P DR F AQK F +++
Sbjct: 64 QIIFASRRGTLMELGIGPIVTAGLIMQILVGAKMINLDMSNPDDRRRFTAAQKTFALILA 123
Query: 527 VGQAIVYVMTGMYGEPS------EIGAGVC--LLIIIQLFVAXXXXXXXXXXXXXXXXXX 682
+A +YV Y P+ + A + + + +QLF+A
Sbjct: 124 AFEAAMYVSACRYWTPTGPNPFFQCSATIYQRIGVGLQLFIATYIVILLDEMIQKGWGIG 183
Query: 683 XXXXXXXATNICETIVWKAFSPXTVN 760
T + + I+W SP T++
Sbjct: 184 SGVSLFILTGVAQRILWNLISPITIS 209
>UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n=2;
Methanococcus|Rep: Preprotein translocase, SecY subunit
- Methanococcus aeolicus Nankai-3
Length = 443
Score = 113 bits (272), Expect = 5e-24
Identities = 55/136 (40%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
Frame = +2
Query: 164 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 343
+FL+ I+P +PE+ +P R+I F+EK+ WTA+ L ++ + I ++ ++ A F
Sbjct: 3 EFLKKIRPILEYIPEVQRPIREITFKEKLKWTALVLIVYFLMGTIDIYTAGATIPAQ-FE 61
Query: 344 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMV 520
+++ I AS GTL+ LGI PIVT+G+IMQLL G+++I++ P++RA F G QKLFG+
Sbjct: 62 YLQTIFASKIGTLITLGIGPIVTAGIIMQLLVGSELIKLDLSKPENRASFQGLQKLFGIF 121
Query: 521 ITVGQAIVYVMTGMYG 568
+ +AI++V G +G
Sbjct: 122 LCFMEAIMFVSVGAFG 137
>UniRef50_UPI00015BB126 Cluster: protein translocase subunit
secY/sec61 alpha; n=1; Ignicoccus hospitalis KIN4/I|Rep:
protein translocase subunit secY/sec61 alpha -
Ignicoccus hospitalis KIN4/I
Length = 479
Score = 111 bits (268), Expect = 1e-23
Identities = 58/136 (42%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
+G K LEV+ + +P + +P+RKI +++ WTA+ L +L+ IPL G+ S +
Sbjct: 4 LGRKALEVLAEIGTYVPAVPRPKRKINLYKRLTWTALALVAYLMMSNIPLPGVSVQTSFN 63
Query: 335 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLF 511
+ ++ A+N GTLM+LGI PIVT+GL++QLL GAKII++ T P+D+ LF AQK F
Sbjct: 64 -LLLMNIVFAANAGTLMQLGIGPIVTAGLVLQLLVGAKIIDLDLTDPEDKKLFTLAQKGF 122
Query: 512 GMVITVGQAIVYVMTG 559
+V+ V +AI V++G
Sbjct: 123 AVVLAVFEAIGLVLSG 138
>UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=4;
Thermococcaceae|Rep: Preprotein translocase subunit secY
- Pyrococcus furiosus
Length = 468
Score = 109 bits (263), Expect = 6e-23
Identities = 49/141 (34%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Frame = +2
Query: 203 PEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTL 382
PE+ +P+R++ RE+ +WT + L ++ V +IP++GI D F ++RV+LA G++
Sbjct: 15 PEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERIQ-DYFQFLRVVLAGRNGSI 73
Query: 383 MELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTG 559
+ LGI PIVT+G+I+QLL G++II++ P+DR + Q++F + + +A V+++ G
Sbjct: 74 LTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWILGG 133
Query: 560 MYGEPS-EIGAGVCLLIIIQL 619
+G ++ + +L+I+QL
Sbjct: 134 AFGRVGVDVTYAIAVLMILQL 154
>UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=2;
Thermoprotei|Rep: Preprotein translocase secY subunit -
Cenarchaeum symbiosum
Length = 478
Score = 109 bits (261), Expect = 1e-22
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Frame = +2
Query: 164 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 343
K + V +P+ LP++ KP++K+ + ++LW + L I++V Q PLFG + D
Sbjct: 12 KMVLVAEPY---LPQVPKPKKKLSLQTRLLWCGLALLIYMVMAQTPLFGATVPEF-DFLA 67
Query: 344 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMV 520
+ RVI AS +GTL+ELGI PIVT+GL+MQLL G++I++ P++R +F A K+ V
Sbjct: 68 FARVIFASQQGTLVELGIGPIVTAGLLMQLLRGSEILKFDFKKPEERGIFQTATKMVSYV 127
Query: 521 ITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXXXX 700
+ V ++ +Y + +YG P V ++I QL +
Sbjct: 128 VIVVESSIYGI-AVYG-PGIADPSVLYILIGQLMASSIIIMFLDELIQKGWGLGSGISLF 185
Query: 701 XATNICETIVWKAFSPXTVNTG 766
+ + I+W FSP G
Sbjct: 186 IMAGVAQQILWSLFSPLPAGDG 207
>UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=10;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Methanococcus vannielii
Length = 438
Score = 109 bits (261), Expect = 1e-22
Identities = 52/148 (35%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +2
Query: 179 IKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVI 358
IKP ++PE+ +P + + F+EK+ WT + L ++ + I ++ + ++ F + + +
Sbjct: 3 IKPILELIPEVKRPLKGVSFKEKIQWTGLVLILYFILGTIDIY-MGGAEMPAMFAFWQTV 61
Query: 359 LASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQ 535
AS GTL+ LGI PIVT+G+IMQLL G+++I + P +RALF G QKLFG+ + +
Sbjct: 62 TASKMGTLITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQKLFGIFLCFLE 121
Query: 536 AIVYVMTGMYGEPSEIGAGVCLLIIIQL 619
A+++V G +G + + + L++++QL
Sbjct: 122 AVMFVGAGAFG---VVNSTLALILVLQL 146
>UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C19G7.17 - Schizosaccharomyces pombe (Fission yeast)
Length = 475
Score = 103 bits (247), Expect = 5e-21
Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +2
Query: 158 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 337
G +F+ IKP S+LPE+ P+ ++ EK+ W A + ++ + IP++G +D+ DP
Sbjct: 3 GARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLDP 62
Query: 338 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFG 514
RV+ S+ LM G++PI S ++Q+LA K I V + DR LF AQK+
Sbjct: 63 INNFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVVS 122
Query: 515 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFV 625
++ + A+ YV +G YG S++G +++I+Q+F+
Sbjct: 123 ALLYLILAVTYVSSGYYGSFSDLGIFRFIMLILQIFL 159
>UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=1;
Aeropyrum pernix|Rep: Preprotein translocase subunit
secY - Aeropyrum pernix
Length = 457
Score = 102 bits (245), Expect = 9e-21
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 3/199 (1%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
MG+ ++V+ P + KPERK ++ WT + L ++ + IPL+GI +
Sbjct: 1 MGV--IDVLAAVGERFPAVRKPERKPTLYRRLAWTGVILVLYFIMSNIPLYGIPPQNIGG 58
Query: 335 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLF 511
R+I AS+ GTLMELGI PIVT+ LI+Q+L GAKII++ P+ R F AQK+
Sbjct: 59 QVDLQRIIFASSAGTLMELGIGPIVTASLIIQVLVGAKIIKLDLADPEGRRKFTSAQKVL 118
Query: 512 GMVITVGQAIVYVMTGMY--GEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXX 685
+ +A+ + + G Y G E G L+ +QLF+
Sbjct: 119 ALAFAALEAVAFTVGGRYWVGTAIEPGPLDYALVSLQLFLGALLVIYFDEVMQKGWGIGS 178
Query: 686 XXXXXXATNICETIVWKAF 742
+ + +VW F
Sbjct: 179 AISLFILAGVAQGVVWSIF 197
>UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n=6;
Euryarchaeota|Rep: Preprotein translocase, SecY subunit
- Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 537
Score = 102 bits (244), Expect = 1e-20
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Frame = +2
Query: 167 FLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYW 346
F I+PF LP + +P + F+ K+ WT L ++ V IPLFG+ S S D F +
Sbjct: 6 FFYAIEPFVRRLPAVERPAGHVHFKRKLGWTVGILLLYFVLSNIPLFGL-SKHSIDLFGY 64
Query: 347 IRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVI 523
R A + G+LM LGI PIVT+ +++QLL GA+II++ P+D+A+F G QK V+
Sbjct: 65 YRAFFAGSFGSLMLLGIGPIVTASIVLQLLVGAEIIKLNLRDPRDQAIFQGTQKALVFVM 124
Query: 524 TVGQAIVYVMTGMYGEPSEIGA---GVCLLII 610
V +A+ + TG Y P + A GV L II
Sbjct: 125 IVVEALPQI-TGGYLLPDQALATSLGVSLSII 155
>UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=1;
Hyperthermus butylicus DSM 5456|Rep: Preprotein
translocase subunit secY - Hyperthermus butylicus
(strain DSM 5456 / JCM 9403)
Length = 464
Score = 99.1 bits (236), Expect = 1e-19
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Frame = +2
Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
MG+ LEV+ +P AKP R+ +++WT + + ++L+ +IPL G+ A
Sbjct: 1 MGV--LEVLAEVSRYIPAAAKPARRPTLPTRLMWTGLVVLLYLIMSEIPLVGVYGYGQAT 58
Query: 335 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLF 511
+ ++L N GTLM LGI PIVT+G+++++L G K+IE+ T P+DR +F GAQ+
Sbjct: 59 QATLMSMLLGMNIGTLMTLGIGPIVTAGIVLEVLVGGKLIELDLTKPRDRKIFMGAQRTL 118
Query: 512 GMVITVGQAIVYVM 553
++ + +A YV+
Sbjct: 119 ALLFALLEAAAYVI 132
>UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=1;
Caldivirga maquilingensis IC-167|Rep: Preprotein
translocase secY subunit - Caldivirga maquilingensis
IC-167
Length = 482
Score = 98.7 bits (235), Expect = 1e-19
Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 2/203 (0%)
Frame = +2
Query: 164 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 343
+F+E+++P +++P + +P R + +++WT + ++L+ PL+GI++S S+ F
Sbjct: 5 RFIEMVEPLLTLMPTVPRPNRPVTLGSRLIWTFLAATVYLLLSVTPLYGIVASSSSPLFN 64
Query: 344 -WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGM 517
+ +I AS GTL +LGI PI+ +G+IM+L+A +++++V + PKD+A F KL +
Sbjct: 65 PLVAIIFASTNGTLAQLGIGPIIIAGIIMELVAFSELMDVDLNDPKDQARFTALTKLVAV 124
Query: 518 VITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXXX 697
+I + + + T + + AG+ ++ +Q+
Sbjct: 125 IIAMFEGAFIMST---HQLTVANAGLAFIVWLQMLFGAVIVILLDDLISKGWGIGSGISL 181
Query: 698 XXATNICETIVWKAFSPXTVNTG 766
+I +I F P TV G
Sbjct: 182 FILISIIRSIFQSTFMPVTVGAG 204
>UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=44;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Archaeoglobus fulgidus
Length = 493
Score = 97.1 bits (231), Expect = 4e-19
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 8/160 (5%)
Frame = +2
Query: 170 LEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWI 349
+ ++P+ +P + +P+ + FREK WTA L ++ + +P+FG+ S +S D F
Sbjct: 5 IRALQPYFERIPSVERPKGHVHFREKFGWTAAILLLYFILSNVPVFGL-SPESIDIFAAY 63
Query: 350 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLFGMVIT 526
R + A + G+++ LGI PIVT+ +I+QLL GA II++ T P+DRA + Q+ V+
Sbjct: 64 RALFAGSTGSIIALGIGPIVTASIILQLLVGAGIIKLDLTNPEDRAAYQDFQRFLVFVMI 123
Query: 527 VGQAIVYVMTGMYGEPSEIGAG-------VCLLIIIQLFV 625
+AI + G+ + A + LI IQLF+
Sbjct: 124 AVEAIPQIAGGLLKPDLNLAAQLGVSPGIISFLIFIQLFI 163
>UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0512000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 466
Score = 96.7 bits (230), Expect = 6e-19
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Frame = +2
Query: 194 SILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSD---SADPFYWIRVILA 364
+++PE+ P++ I R+K +TAI LFIF+ Q+ L+GI DP +W+ +ILA
Sbjct: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
Query: 365 SNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAI 541
S+R TL+ GI I+ +++++ KII + P+ L N AQ+L G+++ + A+
Sbjct: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
Query: 542 VYVMTGMYGEPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXXXXXATNICE 721
+ + + + + LI++Q+ + ATNIC
Sbjct: 132 NFYVRSQHFTVNTV------LIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICV 185
Query: 722 TIVWKAFSPXTV 757
I+WKAFSP +V
Sbjct: 186 NILWKAFSPMSV 197
>UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7;
Saccharomycetales|Rep: Sec sixty-one protein homolog -
Saccharomyces cerevisiae (Baker's yeast)
Length = 490
Score = 95.9 bits (228), Expect = 1e-18
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Frame = +2
Query: 158 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSA-- 331
G + ++++KP ILPE+ P K+ F +K+++T I+L Q PL G+ + +
Sbjct: 3 GFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLFA-QFPLVGLPKATTPNV 61
Query: 332 -DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQK 505
DP Y++R + TL+E G+ P ++SGLI+QLLAG K+I+V DR LF K
Sbjct: 62 NDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTK 121
Query: 506 LFGMVITVGQAIVYVMTGMYGE 571
+F +V V +++ G +G+
Sbjct: 122 VFAIVQYVILTNIFIFAGYFGD 143
>UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=4;
Sulfolobaceae|Rep: Preprotein translocase subunit secY -
Sulfolobus solfataricus
Length = 469
Score = 95.1 bits (226), Expect = 2e-18
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Frame = +2
Query: 161 IKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPF 340
+ F++ + LP + KP+ K +K++W+ + + I+L+ PL+GI S+
Sbjct: 1 MSFIDSLATLGQYLPAVTKPKEKPSLGQKLVWSLVAVIIYLIMASTPLYGITSASFFKNL 60
Query: 341 YWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQK-LFG 514
++I AS GTL +LGI PI+T+GLIMQ+LAG+K+I + + P DR F AQK L
Sbjct: 61 ILEQIIFASTTGTLAQLGIGPIITAGLIMQILAGSKLISIDLNDPDDRVKFTEAQKGLAF 120
Query: 515 MVITVGQAIV-YVMTGMYGEPSEIGAGVCLLIIIQLFVA 628
+ I V A+ YV+ + + ++I QL VA
Sbjct: 121 IFILVESALFGYVLARTSTTINASILFIAGIVIAQLIVA 159
>UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 485
Score = 92.7 bits (220), Expect = 9e-18
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Frame = +2
Query: 227 KIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPI 406
++ F +K+ +T F + IPL+G +S S DP+ + R I AS+ GTLMELG+ P+
Sbjct: 35 QLPFYDKIAYTVGIAITFFIMAGIPLYGAHASTS-DPYSFTRAISASSHGTLMELGVGPM 93
Query: 407 VTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQAIVYVMTGM-YG---- 568
VTSG+I Q+L G + + V D DR LF QK+F +++T AI V YG
Sbjct: 94 VTSGIIFQILGGFQALNVNFDIRADRELFQSGQKIFALLLTFFHAIFLVFFAQTYGTIST 153
Query: 569 --EPSEIGAGVCLLIIIQLFVA 628
SE+ G +LI+ QL A
Sbjct: 154 DSAVSELSLGAAVLIVAQLTAA 175
>UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=4;
Methanomicrobiales|Rep: Preprotein translocase secY
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 479
Score = 92.7 bits (220), Expect = 9e-18
Identities = 46/134 (34%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +2
Query: 164 KFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 343
+ L+ ++P + +P + PE + F+ K+ WTA L ++ IP+FG+ S +S D F
Sbjct: 3 EILDRMEPILAKMPAVKTPEGHVHFKNKLAWTAAILILYFALTNIPVFGL-SPESQDMFQ 61
Query: 344 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRA--LFNGAQKLFGM 517
+ R +LA + G+++ LGI PIVT+ +++QLL GA +I + DT + R + G QKL
Sbjct: 62 YFRALLAGSSGSIVHLGIGPIVTASIVLQLLKGADLIHI-DTSEIRGQIQYMGLQKLMIF 120
Query: 518 VITVGQAIVYVMTG 559
++ V +A+ ++ G
Sbjct: 121 IMIVVEALPMIVGG 134
>UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=5;
Thermoplasmatales|Rep: Preprotein translocase secY
subunit - Picrophilus torridus
Length = 587
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Frame = +2
Query: 200 LPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGT 379
LP I K + + F+ K++WT + + ++ I ++G+ D+ D F R I A G+
Sbjct: 75 LPAIKKAKGHVPFKYKLMWTGLIVILYFALTNIYIYGLNVKDTVDVFAAFRAIFAGASGS 134
Query: 380 LMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLFGMVITVGQAI 541
LM+LGI PIVT+ ++MQL AGAKI + T P D+A++ G QKL +++ +AI
Sbjct: 135 LMDLGIGPIVTASIVMQLFAGAKIFNLDLTNPDDKAIYQGVQKLLVIIMIFVEAI 189
>UniRef50_A3GFV9 Cluster: Protein involved in co-translational
pathway of protein transport; n=6;
Saccharomycetales|Rep: Protein involved in
co-translational pathway of protein transport - Pichia
stipitis (Yeast)
Length = 501
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Frame = +2
Query: 158 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDS--- 328
G + L+++K F +LPE+ P I F E++++T + I+LV QIP++G++ +
Sbjct: 3 GFRLLDLVKFFLPVLPEVEWPVEAISFDERIVFTVGSGIIYLVG-QIPIYGLVPNAQFKI 61
Query: 329 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQK 505
DPF+ R + A +GTL ELG+ P+VT+ QL G K++ V DR LF QK
Sbjct: 62 EDPFFSFRSVFAMEKGTLFELGVLPVVTAAFFWQLAVGLKLVNVNLGLRSDRELFQTGQK 121
Query: 506 LFGMVITVGQAIVYVMTGMY 565
L V+ + + + +G Y
Sbjct: 122 LTSFVLAIVYGVGLIYSGYY 141
>UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=2;
environmental samples|Rep: Preprotein translocase
subunit SecY - uncultured marine group II euryarchaeote
HF70_59C08
Length = 604
Score = 89.8 bits (213), Expect = 6e-17
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Frame = +2
Query: 179 IKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVI 358
+K + P I KPE ++F K+ T L I+ + ++G+ S + D F R I
Sbjct: 96 LKRLVDVYPSITKPEGHVRFNSKLWTTTFVLIIYFAMTNVMIWGL-SEATIDVFSSFRAI 154
Query: 359 LASNRGTLMELGISPIVTSGLIMQLLAGAKII--EVGDTPKDRALFNGAQKLFGMVITVG 532
+A G++M LGI PIVT +IMQL AGAKII ++GD+ D+ L+ G QK+ +++
Sbjct: 155 MAGASGSIMHLGIGPIVTGSIIMQLFAGAKIIKLDLGDS-DDKQLYQGVQKILVLIMIPV 213
Query: 533 QAIVYVMTGMYGEP---SEIGAGVCLLIII-QLFV 625
++I V + P S+ G G II+ QLF+
Sbjct: 214 ESIPQVYGFLDASPALVSDFGQGWANAIIVSQLFI 248
>UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 546
Score = 87.0 bits (206), Expect = 5e-16
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Frame = +2
Query: 230 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 397
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 398 SPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPS 577
P++ S + +++ + +I P N A+KL + + + A+ V++ G +
Sbjct: 75 IPLLLSEMAVRIFSA--LIITRWPPFHHVRLNRARKLLAIAMAMVMAVSGVLSA--GVAA 130
Query: 578 EIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXXXXXATNICETIVWKAFS 745
E+G L+++ QLF+ A N C I WKAF+
Sbjct: 131 ELGTMASLVVMFQLFLGGMIAIYLDELLQKGYGLLSGVSLFAAANCCACIFWKAFT 186
>UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=4;
Pyrobaculum|Rep: Preprotein translocase secY subunit -
Pyrobaculum aerophilum
Length = 459
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/151 (27%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Frame = +2
Query: 188 FCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIM--SSDSADPF-YWIRVI 358
F +++P +++P R++ +++ WTA+ ++++ PL+G+ + P + +I
Sbjct: 4 FLTLIPTVSRPPRRLPLSKRLFWTAVVAIVYIMMTITPLYGVQHTTQQGTQPLQQLLSII 63
Query: 359 LASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITVGQ 535
+ GTL LGI PIV +G+++++ A + I+ + + +DR F K + I +
Sbjct: 64 FGTAYGTLAHLGIGPIVIAGILLEVFAFSGILNLDLNKREDRLKFTLLLKWTALGIAAVE 123
Query: 536 AIVYVMTGMYGEPSEIGAGVCLLIIIQLFVA 628
A+ YV++G +G + +G LLI++QL +A
Sbjct: 124 AVAYVLSGQFGPVTPLGG---LLIVLQLLIA 151
>UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 384
Score = 78.6 bits (185), Expect = 2e-13
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 7/179 (3%)
Frame = +2
Query: 230 IQFREKVLWTAITLFIFLVCCQIPLFGIMS---SDSADPFYWIRVILASNRGTLMELGIS 400
+ FR KVL+TA++L +FLV ++ L+G+ + DP YW+ + AS R T+M LG+
Sbjct: 33 VSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWMNAMSASLRPTVMALGLV 92
Query: 401 PIVTSGLIMQLLAGAKIIEVGD--TPKDRALFNGAQKLFGMVITVGQ--AIVYVMTGMYG 568
P++ S +++ L KII V D P R ++LF M I + AIV + + G
Sbjct: 93 PLLYSEMVVHLCMALKIIGVHDDRLPDHRRRLERTRRLFAMQIAIVSPVAIVLYASAIAG 152
Query: 569 EPSEIGAGVCLLIIIQLFVAXXXXXXXXXXXXXXXXXXXXXXXXXATNICETIVWKAFS 745
I L+ + QL A N C I WKA +
Sbjct: 153 GTPFI-TTAALVFVFQLIAGGLIAIYLDDLLRKGYGFLSGLSLFSAANCCACIFWKALN 210
>UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit
containing protein; n=3; Oryza sativa|Rep: Preprotein
translocase, SecY subunit containing protein - Oryza
sativa subsp. japonica (Rice)
Length = 461
Score = 74.5 bits (175), Expect = 3e-12
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 4/201 (1%)
Frame = +2
Query: 158 GIKFLEVIKPFCSILPEIAKP-ERKIQFREKVLWTAI-TLFIFLVCCQIPLFGIMSSDSA 331
G +++P + P + + E + FR +V TA +L + L +PL+
Sbjct: 13 GTALWRLLRPLAVLGPRMQRRREAAVPFRGQVRNTAAASLLLLLSLSHVPLYAGAGDADP 72
Query: 332 DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLF 511
DP +W R +LA+ RGT+MELG++P+VTS ++++LLA ++ D+ A +
Sbjct: 73 DPLFWARPLLAAPRGTVMELGVAPVVTSWVVVRLLAA--LLFDSDSSTTVASCELLARCL 130
Query: 512 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFV--AXXXXXXXXXXXXXXXXXXX 685
V + ++ + + G GAG L+++QLF
Sbjct: 131 AYVTNASRLVIGIAAAL-GMCGSGGAGNAALVVLQLFAGGVVVVLADLLHETGYGVEGVS 189
Query: 686 XXXXXXATNICETIVWKAFSP 748
ATN CE V FSP
Sbjct: 190 AASLLIATNACERAVSHLFSP 210
>UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:
NEQ168 - Nanoarchaeum equitans
Length = 476
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/136 (25%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = +2
Query: 176 VIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRV 355
+++ LP I KP+ +++ W+AI + ++L+ PL G+ S A F + V
Sbjct: 4 IVEKVVQKLPTIKKPKYLTNL-DRLKWSAIAVILYLLLSYTPLIGV-SQTGAGVFEELVV 61
Query: 356 ILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKD-RALFNGAQKLFGMVITVG 532
+L ++ G+++ LGI PI+ L+ +L G+ + + T ++ + F + F +V +
Sbjct: 62 LLGASFGSIVSLGIGPIIIGYLLAELFIGSGELNIDITTEEGKRKFENLARFFMIVFGLF 121
Query: 533 QAIVYVMTGMYGEPSE 580
++IV G + +PS+
Sbjct: 122 ESIVMATIGWF-KPSQ 136
>UniRef50_O13579 Cluster: Putative uncharacterized protein YLR379W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YLR379W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 124
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/79 (39%), Positives = 40/79 (50%)
Frame = -2
Query: 405 IGEIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGIWQHTKKINNVIAVHNTFSRN*IL 226
+GE P+S VP +A + R Q +GS +S D IP GIW KKI+ V +F
Sbjct: 2 MGETPNSSKVPRLEASMARSQYRGSEVSLDTIPYSGIWPRIKKISRETPVQISFWLYGTF 61
Query: 225 RSGFAISGNILQNGLITSK 169
SG SG NGL S+
Sbjct: 62 LSGAITSGRKDSNGLNKSR 80
>UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_136,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +2
Query: 359 LASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQA 538
+A R T +E G+S +VT+ +I+QL A AK+ +V + + F + + +IT+G+A
Sbjct: 16 IAFKRETQVEFGMSLMVTASMIIQLFAAAKLTDVDQNRRRISNFLRSIDVIENIITLGEA 75
Query: 539 IVYVMTGMYGEPSEIGAGVCLL 604
VYV + +IG C L
Sbjct: 76 FVYVPSRDVWRFGQIGNIQCYL 97
>UniRef50_A7N5J2 Cluster: Putative uncharacterized protein; n=1;
Vibrio harveyi ATCC BAA-1116|Rep: Putative
uncharacterized protein - Vibrio harveyi ATCC BAA-1116
Length = 329
Score = 36.3 bits (80), Expect = 0.84
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = +2
Query: 254 WTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQL 433
W I IF++ + + + S +A F + ++ + GT MEL ++ +M L
Sbjct: 77 WALIVSSIFVIYSYLRIEKLASFSTAPVFLYCYGLINTTYGTSMELYFYQLLHVAFMMLL 136
Query: 434 LAGAKIIEVGDTPKDRALFNGAQKLF--GMVITVGQAIVYVMTGMYGEPSEIGAGV-CLL 604
LA A I + TP ++ QK+ + V I+ ++ +Y E+G + CL
Sbjct: 137 LAKA-IFWILPTPSNQMSSKQNQKVVKRSKALNVISTIIISLSLVYFLSIEVGKAIFCLS 195
Query: 605 IIIQL 619
+II +
Sbjct: 196 VIISI 200
>UniRef50_Q839E4 Cluster: Preprotein translocase, SecY subunit;
n=13; Lactobacillales|Rep: Preprotein translocase, SecY
subunit - Enterococcus faecalis (Streptococcus faecalis)
Length = 432
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Frame = +2
Query: 239 REKVLWTAITLFIFLVCCQIPLFGIMSSDSAD----PFY-WIRVILAS--NRGTLMELGI 397
R K+L+T + LF+F + I + G+ + +D PF + ++ S ++ +G+
Sbjct: 15 RSKILFTVLILFVFRLGAHITVPGVNAKGLSDLSSLPFLNMLNMVSGSAMQNFSIFSMGV 74
Query: 398 SPIVTSGLIMQLL 436
SP +T+ +I+QLL
Sbjct: 75 SPYITASIIIQLL 87
>UniRef50_A1RJU5 Cluster: Putative uncharacterized protein; n=7;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella sp. (strain W3-18-1)
Length = 1305
Score = 35.9 bits (79), Expect = 1.1
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = -2
Query: 456 SMILAPASNCMMSPDVTIG------EIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGI 295
++I P + +SPD+T+ E+ ++NVP + +I ++ G ALS+D++ N I
Sbjct: 994 AVIQPPLAILDISPDLTLSFSSEQLEVKGTVNVPSGNIKIVQLAEGGVALSEDVVFNDSI 1053
Query: 294 WQHTKKIN--NVIAVHNTFSRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTI 130
K + ++A N N + G + G + + + F P L++ D+ +
Sbjct: 1054 AAAQPKSSPYAIVADLNINVGNDLRVDGMGLKGKLQGTLKLQQQAFRPPLLFGDIKV 1110
>UniRef50_Q084M0 Cluster: Putative uncharacterized protein; n=1;
Shewanella frigidimarina NCIMB 400|Rep: Putative
uncharacterized protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 1304
Score = 35.5 bits (78), Expect = 1.5
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = -2
Query: 468 VSPTSMILAPASNCMMSPDVTIGEIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGIWQ 289
+ P IL + + M+ D + I ++VP +IT++ G A+S+D++ N + +
Sbjct: 995 IQPPMAILNVSPDINMTFDEQLFAIKGKVDVPSGQIKITQLAEGGVAVSNDVVFNDSVSE 1054
Query: 288 HTKKIN--NVIAVHNTFSRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTI 130
T K + V A N + G + G + + ++ + F P +++ D+ +
Sbjct: 1055 QTVKTSPYAVTADLNISVGKRLTIDGMGLKGRLEGDLILKQQAFKPPMLFGDIKV 1109
>UniRef50_Q8IR56 Cluster: CG32599-PA; n=3; Sophophora|Rep:
CG32599-PA - Drosophila melanogaster (Fruit fly)
Length = 317
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 652 IEQQHNKTGHKQLYDNEEAHSGTNFTGFAIHSSHYINNSLTN-SNHHTK 509
IE + H + + HSGT+ TG A S HY+N L N H K
Sbjct: 148 IELEEKHARHAKKAQSHHGHSGTDSTGSASSSLHYVNELLPNGGGEHRK 196
>UniRef50_Q6NGC5 Cluster:
Phospho-N-acetylmuramoyl-pentapeptide-transferase; n=45;
Actinobacteria (class)|Rep:
Phospho-N-acetylmuramoyl-pentapeptide-transferase -
Corynebacterium diphtheriae
Length = 366
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +2
Query: 350 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITV 529
++I+A G L+ + ++P++ + L G +I E D PK G + G+ I +
Sbjct: 3 QIIIAGAVGLLVSIFVTPVLIRRFSAEGL-GQEIRE--DGPKSHLRKRGTPTMGGIAILI 59
Query: 530 GQAIVYVMTGMYGEPSEIG 586
G + Y +TG+ G+ + G
Sbjct: 60 GITVAYAVTGIVGQVTGTG 78
>UniRef50_Q55DH3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 450
Score = 34.3 bits (75), Expect = 3.4
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Frame = -1
Query: 739 CLPYNG-FTDVCSNXQRDTRTQSISFXEQF-IEQQHNKTGHKQLYDNEEAHSGTNFTGFA 566
C+ G F + SN +T + E F I +N DN ++ +N F
Sbjct: 223 CIMNGGNFNEFGSNQDNNTFNCTFKLCENFQINNSNNSDNSNSDNDNNNQNNSSNKESFC 282
Query: 565 IHSSHYINNSLTNSNHHTK*FLCTIKQSPVFRSVTNFNDFSTS 437
S+ NSN + ++ T KQS V + N N S S
Sbjct: 283 FIKKDISVKSIENSNTSSSNWVLTNKQSLVINNNNNCNSNSNS 325
>UniRef50_Q4FR55 Cluster: Possible rhomboid family protein; n=3;
Psychrobacter|Rep: Possible rhomboid family protein -
Psychrobacter arcticum
Length = 376
Score = 33.9 bits (74), Expect = 4.5
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 655 FIEQQHNKTGHKQLYDNEEAHSGTNFTGFAIHS-SHYINNSLTNSN 521
F QQH+ TGH +DN+ + T+ ++H+ SH NNS NSN
Sbjct: 261 FTSQQHH-TGHGTDFDNKTHLNSTHLNHDSLHNESHVDNNSGVNSN 305
>UniRef50_Q18CH6 Cluster: Preprotein translocase SecY subunit
precursor; n=1; Clostridium difficile 630|Rep:
Preprotein translocase SecY subunit precursor -
Clostridium difficile (strain 630)
Length = 422
Score = 33.9 bits (74), Expect = 4.5
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Frame = +2
Query: 239 REKVLWTAITLFIFLVCCQIPLFGIMSS--------DSADPFYWIRVILASNRGTLMELG 394
R+KV++T + + IF + IP+ GI +S +S Y + A + +L LG
Sbjct: 15 RKKVMYTLMMIVIFRIGTTIPVPGIDTSIIQKMVGGNSLLSLYNMFTGGAFSNFSLFALG 74
Query: 395 ISPIVTSGLIMQLL 436
ISP +T+ +I+QLL
Sbjct: 75 ISPYITASIIIQLL 88
>UniRef50_A1S616 Cluster: Putative uncharacterized protein; n=1;
Shewanella amazonensis SB2B|Rep: Putative uncharacterized
protein - Shewanella amazonensis (strain ATCC BAA-1098 /
SB2B)
Length = 1297
Score = 33.9 bits (74), Expect = 4.5
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Frame = -2
Query: 456 SMILAPASNCMMSPDVTIG------EIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGI 295
++I+ P + +SPDVT+ ++ S+N+P + +I ++ G A+S D++ + I
Sbjct: 987 AVIVPPMALLDVSPDVTLTFDAAMLDLKGSVNIPTGNIKIVQLAEGGVAVSPDVVFDDSI 1046
Query: 294 WQHTKKIN--NVIAVHNTFSRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTILT 124
+ +K + V A N + + G + G + + + F P L++ D+ +L+
Sbjct: 1047 AEAEQKTSPYGVTADLNIRVGDQVKIEGMGLKGRLDGTLRLQQQAFKPPLLFGDVKVLS 1105
>UniRef50_A0CEN2 Cluster: Chromosome undetermined scaffold_172, whole
genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_172, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1988
Score = 33.9 bits (74), Expect = 4.5
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -1
Query: 721 FTDVCSNXQRDTRTQS--ISFXEQFIEQQHNKTGHKQLYDNEEAHSGTNFTGFAI--HSS 554
++ +C TR QS I EQ + Q ++ K Y + H +N F I + S
Sbjct: 1762 YSGICFEFVEVTREQSNVIRNFEQDVMQSRSEPVQKTNY--QRRHQKSNIDSFIIGGNYS 1819
Query: 553 HYINNSLTNSN 521
HY+NN TN N
Sbjct: 1820 HYLNNKATNKN 1830
>UniRef50_Q6KI36 Cluster: Preprotein translocase secY subunit; n=1;
Mycoplasma mobile|Rep: Preprotein translocase secY
subunit - Mycoplasma mobile
Length = 472
Score = 33.5 bits (73), Expect = 5.9
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +2
Query: 224 RKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVI-LASNRG----TLME 388
+K K+++T L IF + I L G+ S + D ++ ++ L G +++
Sbjct: 32 KKRALLNKIVFTIFLLSIFAIAGSITLPGV-SVGNLDSNTFLGILNLVGGGGLRNFSIVA 90
Query: 389 LGISPIVTSGLIMQLL 436
LGISP +T+ L+MQ+L
Sbjct: 91 LGISPFITASLVMQIL 106
>UniRef50_O96185 Cluster: Putative uncharacterized protein PFB0460c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0460c - Plasmodium falciparum
(isolate 3D7)
Length = 2573
Score = 33.5 bits (73), Expect = 5.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 649 EQQHNKTGHKQLYDNEEAHSGTNFTGFAIHSSHYINNSLTNSNHHT 512
+ HN H + N+ H + T F+ +H+ N+ NSN HT
Sbjct: 543 DHTHNSNDHTH-FSNDHTHFSNDHTHFSNDHTHFSNDHTHNSNDHT 587
>UniRef50_O25879 Cluster: Preprotein translocase subunit secY; n=27;
Epsilonproteobacteria|Rep: Preprotein translocase
subunit secY - Helicobacter pylori (Campylobacter
pylori)
Length = 420
Score = 33.5 bits (73), Expect = 5.9
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Frame = +2
Query: 245 KVLWTAITLFIFLVCCQIPLFGI----------MSSDSADPFYWIRVILASNRGTLMELG 394
K+L T LF++ V IP+ G+ +S++A + + A +R +++ LG
Sbjct: 8 KILITLGFLFLYRVLAYIPIPGVDLAAIKAFFDSNSNNALGLFNMFSGNAVSRLSIISLG 67
Query: 395 ISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMV--ITVGQAIVYVMTGMYG 568
I P +TS +IM+LL+ A + K+R +G QK +V +T+ ++ ++ G
Sbjct: 68 IMPYITSSIIMELLS-ATFPNLAKMKKER---DGMQKYMQIVRYLTILITLIQAVSVSVG 123
Query: 569 EPS-EIGAGVCLLIIIQLFV 625
S GA ++I +Q+F+
Sbjct: 124 LRSISGGANGAIMIDMQVFM 143
>UniRef50_UPI00006CDD72 Cluster: hypothetical protein
TTHERM_00294600; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00294600 - Tetrahymena
thermophila SB210
Length = 1219
Score = 33.1 bits (72), Expect = 7.9
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 189 SAVYCQK*RNQNVRFNSERKYYGQ 260
S Y +K NQNV FNS+R+Y GQ
Sbjct: 566 SQKYTKKKENQNVNFNSQRRYQGQ 589
>UniRef50_Q3W8J5 Cluster: Regulatory protein, TetR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 212
Score = 33.1 bits (72), Expect = 7.9
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +2
Query: 311 IMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALF 490
+ + DSA+ W++V+ AS T + LG+S + +G++ + L GA++ + D + L
Sbjct: 110 VAAEDSAEVARWVQVVEASLYATRVMLGVSILEFNGVLAEFL-GARLGKAPDDLEPAMLA 168
Query: 491 NGAQKLFGMVITVGQAIVYVMTG 559
A G +I Q Y++ G
Sbjct: 169 VAA----GAIILAAQTRWYLLGG 187
>UniRef50_Q54RC2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1319
Score = 33.1 bits (72), Expect = 7.9
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = -1
Query: 733 PYNGFTDVCSNXQRDTRTQSISFX------EQFIEQQHNKTGHKQLYDNEEAHSGTNFTG 572
P G + +N + +TQ + Q +QQ +Q ++ H + TG
Sbjct: 367 PRKGVNNRNNNSKIKNKTQQVQMNILQAQQAQLQQQQQQAQLQQQQQQQQQQHQSPSLTG 426
Query: 571 FAIHSSHYINNSLTNSNHHTK*FLCTIKQSPVFRSVTNFNDFS 443
++++ NNS +N+N+ T T SP +S++N FS
Sbjct: 427 TNLNNN---NNSNSNNNNPTSSTNSTPNLSPTIQSMSNIPGFS 466
>UniRef50_Q54R63 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1846
Score = 33.1 bits (72), Expect = 7.9
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -1
Query: 697 QRDTRTQSISFXEQF-IEQQHNKTGHKQLYDNEEAHSGTNFTGFAIHSSHYINNSLTNSN 521
Q + QSI +Q ++Q + +Q N++ N T I S Y + N+N
Sbjct: 1043 QPQPQPQSIQPQQQSQLQQSQSIQKQQQSNTNKQVTQEFNLTSSQIQQSQYQSTIANNNN 1102
Query: 520 HHTK*FLCTIKQSPVFRSVTNFNDFSTS 437
++T L T F TN N+F TS
Sbjct: 1103 NNTTNILSTNNN---FNQTTNTNNFGTS 1127
>UniRef50_Q54F11 Cluster: Putative homeobox transcription factor;
n=1; Dictyostelium discoideum AX4|Rep: Putative homeobox
transcription factor - Dictyostelium discoideum AX4
Length = 667
Score = 33.1 bits (72), Expect = 7.9
Identities = 23/107 (21%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = -1
Query: 736 LPYNGFTDVCSNXQRDTRTQSISFXEQFIEQQH-NKTGHKQLYDNEEAHSGTNFTGFAIH 560
+P + + + D Q+I F +++ +H +++ +K++ + +HS +N ++
Sbjct: 295 IPISNYYQQAAQTIFDDNFQTIQFNKEYPLNEHISQSTNKRMKISHHSHSLSNNNENSL- 353
Query: 559 SSHYINNSLTNSNHHTK*FLCTIKQSPVFRSVTNFNDFSTSKQLHDE 419
S Y NN+ N+N + + +Q+P F N N +T +Q ++
Sbjct: 354 SQPYFNNNNNNNNENENVYNIVNEQNPTF----NPNQSNTHQQQEEQ 396
>UniRef50_A5K4F3 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 745
Score = 33.1 bits (72), Expect = 7.9
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -1
Query: 691 DTRTQSISFXEQFIEQQHNKTGHKQLYDNEE-AHSGTNFTGFAIHSSHYINNSLTNSNHH 515
D +++++F F +H K K++ + ++SG + G + SS NN + ++
Sbjct: 158 DLSSENLNFKYYFTRGKHYKKAEKKVTKEKNGSNSGGSSGGSSGGSSGGSNNGNSGNSAD 217
Query: 514 TK*FLCTIKQSPVFRSVTNFND 449
K F+C K+ +F+ TNF D
Sbjct: 218 IKIFICLNKKKKLFQ-FTNFYD 238
>UniRef50_P27148 Cluster: Preprotein translocase subunit secY; n=52;
cellular organisms|Rep: Preprotein translocase subunit
secY - Lactococcus lactis subsp. cremoris (Streptococcus
cremoris)
Length = 439
Score = 33.1 bits (72), Expect = 7.9
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Frame = +2
Query: 239 REKVLWTAITLFIFLVCCQIPLFGIMSSDS---AD-PFYWIRVILASN---RGTLMELGI 397
R ++L+T LF+F + I G+ + AD PF + +++ N +L +G+
Sbjct: 16 RARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGNAMQNYSLFAMGV 75
Query: 398 SPIVTSGLIMQLLAG---AKIIEVGDTPK-DRALFNGAQKLFGMVITVGQAI 541
SP +T+ +I+QLL K +E + R N A + +V+ + Q+I
Sbjct: 76 SPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQSI 127
>UniRef50_P38375 Cluster: Preprotein translocase subunit secY; n=18;
Firmicutes|Rep: Preprotein translocase subunit secY -
Bacillus halodurans
Length = 430
Score = 33.1 bits (72), Expect = 7.9
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +2
Query: 239 REKVLWTAITLFIFLVCCQIPLFGIMSS-----DSADPFYWIRVILASNRG--TLMELGI 397
R KV++T + L +F + IP+ G D A+ F ++ G ++ +GI
Sbjct: 15 RRKVIFTLLMLIVFRIGSFIPVPGTNREVLDFVDQANAFGFLNTFGGGALGNFSIFAMGI 74
Query: 398 SPIVTSGLIMQLL 436
P +T+ ++MQLL
Sbjct: 75 MPYITASIVMQLL 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,992,758
Number of Sequences: 1657284
Number of extensions: 15178896
Number of successful extensions: 40969
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 38394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40823
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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