Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F21
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...   163   4e-42
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    24   4.5  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    24   4.5  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   4.5  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   6.0  

>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
           protein.
          Length = 77

 Score =  163 bits (397), Expect = 4e-42
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +2

Query: 155 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 334
           MGIKFLE+IKPFC ILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1   MGIKFLEIIKPFCGILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 335 PFYWIRVILASNRGTLM 385
           PFYWIRVILASNRGTLM
Sbjct: 61  PFYWIRVILASNRGTLM 77


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +2

Query: 308 GIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDR 481
           G+  ++  DPF      L   R   +   ++P  TSG +  +L    +++VG+   DR
Sbjct: 100 GVYCNEEHDPFSANLFALPGQRWKNLRAKLTPTFTSGQLRNML--PTLLDVGNKLIDR 155


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +2

Query: 308 GIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGD 466
           G+ S++  DP       L  NR   +   ++P  TSG +  +     I++VG+
Sbjct: 105 GVYSNEEVDPLSANLFFLEGNRWGKLRSKLAPTFTSGKLKAMF--HTIVDVGN 155


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +2

Query: 308 GIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDR 481
           G+  ++  DPF      L   R   +   ++P  TSG +  +L    +++VG+   DR
Sbjct: 100 GVYCNEEHDPFSANLFALPGQRWKNLRAKLTPTFTSGQLRNML--PTLLDVGNKLIDR 155


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 618 CLWPVLLCCCSMNCS 662
           C+W +   CCS  CS
Sbjct: 33  CVWMLCEVCCSRKCS 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,356
Number of Sequences: 2352
Number of extensions: 17947
Number of successful extensions: 82
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)