Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F19
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    26   0.38 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   6.2  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.2  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 342 VQGLRKKQFHQTRVHLKIVVM 404
           V  +  K FH+  +H+KIV+M
Sbjct: 48  VVSIYSKSFHRNEIHIKIVLM 68


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = +3

Query: 390 KIVVMLIGRRLEIDHQQETKKNLCYLYQMTKLKL 491
           K  ++L+G +++ID ++E    +  + ++ + KL
Sbjct: 222 KTKILLVGLKIDIDQEEERNVVVTSVLKLMQNKL 255


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 513 QDVRSENAHHHHDQLVSTLD 572
           Q   S    HHHD +  +LD
Sbjct: 98  QQTHSSIHQHHHDPMKMSLD 117


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 513 QDVRSENAHHHHDQLVSTLD 572
           Q   S    HHHD +  +LD
Sbjct: 249 QQTHSSIHQHHHDPMKMSLD 268


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 513 QDVRSENAHHHHDQLVSTLD 572
           Q   S    HHHD +  +LD
Sbjct: 308 QQTHSSIHQHHHDPMKMSLD 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,680
Number of Sequences: 336
Number of extensions: 2563
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)