Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_F19
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 88 6e-18
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 2e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 42 4e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 5e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 5e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 6e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.001
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 39 0.003
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 39 0.003
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 39 0.003
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.006
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 38 0.006
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.006
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 38 0.006
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 38 0.008
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 38 0.008
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 38 0.010
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 38 0.010
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 38 0.010
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 38 0.010
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 34 0.096
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 34 0.13
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 33 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.22
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 33 0.29
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 33 0.29
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 33 0.29
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 33 0.29
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 32 0.51
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 32 0.51
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 31 0.68
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 31 0.68
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 31 0.68
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 31 0.68
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 31 0.90
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 31 0.90
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.90
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 31 1.2
AC024875-4|AAK29990.1| 143|Caenorhabditis elegans U2af splicing... 31 1.2
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 31 1.2
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 31 1.2
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 31 1.2
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 31 1.2
Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical p... 29 2.7
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 29 2.7
Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 29 2.7
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 29 2.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 2.7
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z82060-3|CAB04883.1| 206|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 28 6.3
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 28 6.3
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 28 6.3
AF022969-2|AAB69893.2| 354|Caenorhabditis elegans Hypothetical ... 28 6.3
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.4
AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical... 28 8.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.4
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 88.2 bits (209), Expect = 6e-18
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+ I L+ NV + H+ EIFS YG +K+++ P DR H H RGY YVE++N ++A ++K
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 737 HMDGGQIDG 763
HMDGGQIDG
Sbjct: 194 HMDGGQIDG 202
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +G ++ +V+ D I IFS G V SI+ DR +GY ++EF + A A+++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDR-ETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 740 MDGGQIDGQ 766
++G ++ G+
Sbjct: 79 LNGYELSGR 87
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
++++G L +V + +IF YG +K ++ R G +A+VEF + +A +A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR-----GPAFAFVEFEDHRDAEDAVR 64
Query: 737 HMDGGQIDGQ 766
DG + DG+
Sbjct: 65 ARDGYEFDGR 74
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
++++G L +V + +IF YG +K ++ R G +A+VEF + +A +A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR-----GPAFAFVEFEDHRDAEDAVR 64
Query: 737 HMDGGQIDGQ 766
DG + DG+
Sbjct: 65 ARDGYEFDGR 74
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+++G T + + FS+ G + ++ DR RG+A++EF A A++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDR-ETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 740 MDGGQIDGQ 766
M+G + +G+
Sbjct: 66 MNGAEFNGR 74
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +GR+ + + F YG +K + D RGYA++E+++ E A K
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAG--KPRGYAFIEYSDKAEMHTAYKK 163
Query: 740 MDGGQIDGQ 766
DG ++DG+
Sbjct: 164 ADGIKVDGK 172
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
+RI++G ++ + D + F +G +KSI D H+ + +A+VE+ + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHH-KTFAFVEYEVPEAALLAQ 160
Query: 734 KHMDGGQIDGQ 766
+ M+G + G+
Sbjct: 161 ESMNGQMLGGR 171
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAXNAM 733
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 734 KHMDGGQIDGQ 766
M+ + GQ
Sbjct: 266 AGMNMFDLGGQ 276
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
+RI++G ++ + D + F +G +KSI D H+ + +A+VE+ + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHH-KTFAFVEYEVPEAALLAQ 160
Query: 734 KHMDGGQIDGQ 766
+ M+G + G+
Sbjct: 161 ESMNGQMLGGR 171
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAXNAM 733
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 734 KHMDGGQIDGQ 766
M+ + GQ
Sbjct: 266 AGMNMFDLGGQ 276
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
+RI++G ++ + D + F +G +KSI D H+ + +A+VE+ + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHH-KTFAFVEYEVPEAALLAQ 160
Query: 734 KHMDGGQIDGQ 766
+ M+G + G+
Sbjct: 161 ESMNGQMLGGR 171
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAXNAM 733
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 734 KHMDGGQIDGQ 766
M+ + GQ
Sbjct: 266 AGMNMFDLGGQ 276
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
T + I L+ T + + F YG + + P D+ + +G+ +V F +A +A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDK-YSRQSKGFGFVRFYERRDAEHAL 77
Query: 734 KHMDGGQIDGQ 766
DG +DG+
Sbjct: 78 DRTDGKLVDGR 88
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
T + I L+ T + + F YG + + P D+ + +G+ +V F +A +A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDK-YSRQSKGFGFVRFYERRDAEHAL 77
Query: 734 KHMDGGQIDGQ 766
DG +DG+
Sbjct: 78 DRTDGKLVDGR 88
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+++G T +VT + F +G V +I PMD RG+ +VEF+ A++A A+ +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMD-YESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 740 MDGGQIDGQ 766
M+ ++ G+
Sbjct: 72 MNESELFGK 80
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNA 730
T++ + L + + +F T+G VK+I P RG+ +V+F +ADEA A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 683 GYAYVEFNNADEAXNAMKHMDGGQIDG 763
G+ +V+F A +A A+K M G +DG
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDG 716
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 590 TRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKHMDGGQIDGQ 766
T D +H+ FS YG +K+I +DR +GYA VE+ EA A+ + + GQ
Sbjct: 67 TEDDVHDKFSEYGKIKNIHLNLDR-RTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQ 124
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/69 (27%), Positives = 41/69 (59%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +A +A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 737 HMDGGQIDG 763
+DG +I G
Sbjct: 58 ALDGSRICG 66
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/69 (27%), Positives = 41/69 (59%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +A +A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 737 HMDGGQIDG 763
+DG +I G
Sbjct: 58 ALDGSRICG 66
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/69 (27%), Positives = 41/69 (59%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +A +A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 737 HMDGGQIDG 763
+DG +I G
Sbjct: 58 ALDGSRICG 66
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+++G T D + FS G V ++ DR RG+A+VEF A A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDR-ETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 740 MDGGQIDGQ 766
+G +G+
Sbjct: 65 FNGVDFNGR 73
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +A +A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 737 HMDGGQIDGQ 766
++G ++ G+
Sbjct: 55 DLNGKELGGE 64
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +A +A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 737 HMDGGQIDGQ 766
++G ++ G+
Sbjct: 55 DLNGKELGGE 64
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +A +A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 737 HMDGGQIDGQ 766
++G ++ G+
Sbjct: 55 DLNGKELGGE 64
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 730
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 128 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 178
Query: 731 MKHMDGGQIDGQ 766
+ M+ + GQ
Sbjct: 179 IVQMNNQDVGGQ 190
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 740 MDG 748
M+G
Sbjct: 83 MNG 85
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 730
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 138 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 188
Query: 731 MKHMDGGQIDGQ 766
+ M+ + GQ
Sbjct: 189 IVQMNNQDVGGQ 200
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 740 MDG 748
M+G
Sbjct: 93 MNG 95
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 730
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 241 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 291
Query: 731 MKHMDGGQIDGQ 766
+ M+ + GQ
Sbjct: 292 IVQMNNQDVGGQ 303
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 740 MDG 748
M+G
Sbjct: 196 MNG 198
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+++G L VT D I +F+ G+V + D + YA+VEF++ +A A++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG----SNDPYAFVEFSDHGQASQALQT 103
Query: 740 MD 745
M+
Sbjct: 104 MN 105
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAXNA 730
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 209 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 259
Query: 731 MKHMDGGQIDGQ 766
+ M+ + GQ
Sbjct: 260 IVQMNNQDVGGQ 271
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +G L+ V + E F +G V + D + +GY +V + +EA A++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 740 MDG 748
M+G
Sbjct: 164 MNG 166
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+++G + T + I + F G+V + DR H +G+AYVEF + NA+
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHP-KGFAYVEFTEKEGMQNALAM 138
Query: 740 MD 745
D
Sbjct: 139 TD 140
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
T + + L + I +IF ++G ++ I+ +D RG+A + F NAD+A +
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS--NRENRGFATITFRNADDAQKSC 184
Query: 734 KHMDGGQIDGQ 766
+ ++ ++ G+
Sbjct: 185 EQLNNFELAGR 195
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
T + + L + I +IF ++G ++ I+ +D RG+A + F NAD+A +
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS--NRENRGFATITFRNADDAQKSC 329
Query: 734 KHMDGGQIDGQ 766
+ ++ ++ G+
Sbjct: 330 EQLNNFELAGR 340
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+I +G LT N T D + E +S +G + I D + RG+ +V F+ E AMK
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRS-RGFGFVTFSGKTEVDAAMK 82
Query: 737 H----MDGGQID 760
+DG +D
Sbjct: 83 QRPHIIDGKTVD 94
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+I +G LT N T D + E +S +G + I D + RG+ +V F+ E AMK
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRS-RGFGFVTFSGKTEVDAAMK 82
Query: 737 H----MDGGQID 760
+DG +D
Sbjct: 83 QRPHIIDGKTVD 94
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+I +G LT N T D + E +S +G + I D + RG+ +V F+ E AMK
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRS-RGFGFVTFSGKTEVDAAMK 82
Query: 737 H----MDGGQID 760
+DG +D
Sbjct: 83 QRPHIIDGKTVD 94
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
I + L N T IHE F+ T++ ++F P+ G AYVEF N +EA AM++
Sbjct: 66 IRLRGLPFNATEKDIHEFFAGL-TIERVKFVCTTGRPN---GEAYVEFKNTEEAGKAMEN 121
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+++G + T + I F+ G V ++ DR RG+A+VEF+ A A++
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDR-ETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 740 MDGGQIDGQ 766
++G +G+
Sbjct: 67 LNGVAFNGR 75
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
T ++I L N D + E+ S YG + S + MD+ +N +GY +V+F + A A+
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKA-TNNCKGYGFVDFESPQAAAAAV 165
Query: 734 KHMDGGQIDGQ 766
++ + Q
Sbjct: 166 DGLNTEGVQAQ 176
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
T ++I L N D + E+ S YG + S + MD+ +N +GY +V+F + A A+
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKA-TNNCKGYGFVDFESPQAAAAAV 139
Query: 734 KHMDGGQIDGQ 766
++ + Q
Sbjct: 140 DGLNTEGVQAQ 150
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +G L+ +V+ + + F+ +G V + D + +GY +V F N A NA+
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRD-VQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 740 MDG 748
M+G
Sbjct: 196 MNG 198
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +2
Query: 554 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
T +++G ++ T + ++FSTYG + + + YA+V + + A A+
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRI-------FKTQRYAFVRYEKKECATKAI 289
Query: 734 KHMDGGQIDG 763
M+G ++ G
Sbjct: 290 MEMNGKEMAG 299
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/67 (22%), Positives = 36/67 (53%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+++G L+ D ++E+F G V+ + +DR G+ +VE+ ++A A+++
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRF-KKTPCGFCFVEYYTREDAELALQN 97
Query: 740 MDGGQID 760
+ ++D
Sbjct: 98 ISNTRMD 104
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ + +L T + + IFS +G + + E DR + YA++EF+NA A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 740 MDGGQID 760
MD ID
Sbjct: 302 MDNVLID 308
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ + +L T + + IFS +G + + E DR + YA++EF+NA A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 740 MDGGQID 760
MD ID
Sbjct: 302 MDNVLID 308
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ + +L T + + IFS +G + + E DR + YA++EF+NA A
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 232
Query: 740 MDGGQID 760
MD ID
Sbjct: 233 MDNVLID 239
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 608 EIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKHMDGGQIDGQ 766
++FS +G + +++ D +GYA+V +N EA NAM ++G + G+
Sbjct: 392 QLFSQFGAIVNVKILRDLTQ--QCKGYAFVSMSNYTEAYNAMLSLNGTNLAGK 442
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
+ IG + N T + I E F G + P D+ + +AY+EF+++ NA+
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQ-KNFAYIEFDDSSSIENAL 113
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ +G L + + E F +G V + D + + G+GY +V + ++A A+
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDN-NTNKGKGYGFVSYPRREDAERAIDE 192
Query: 740 MDG 748
M+G
Sbjct: 193 MNG 195
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
I +G L V +++ FS +G + + M + +G+A++ F + + + A++
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 740 MDG 748
M+G
Sbjct: 162 MNG 164
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
I +G L V +++ FS +G + + M + +G+A++ F + + + A++
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 740 MDG 748
M+G
Sbjct: 172 MNG 174
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
++I + VT + ++E+F Y ++ ++ D YA++ FN D+ AM+
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD---------YAFIHFNERDDCLKAMEE 429
Query: 740 MDGGQIDG 763
+G +++G
Sbjct: 430 WNGKELEG 437
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 740 MDGGQI 757
+ G QI
Sbjct: 285 LQGFQI 290
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 740 MDGGQI 757
+ G QI
Sbjct: 285 LQGFQI 290
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 740 MDGGQI 757
+ G QI
Sbjct: 285 LQGFQI 290
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 740 MDGGQI 757
+ G QI
Sbjct: 285 LQGFQI 290
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
+ IG + N T + + E F G + P D+ + +AY+EF+++ NA+
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQ-KNFAYIEFDDSSSIENAL 119
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 575 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKHMDGGQ 754
L+ T + ++F +G + + DR N RG+ ++ FN ++A A +
Sbjct: 83 LSSYTTEKDLRDVFGEFGEINKCDLVYDR-PSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 755 IDG 763
+DG
Sbjct: 142 LDG 144
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+H+ + + +F G V +E + +G+ +V N D+A A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE---RGSKGFGFVTMQNPDDADRARA 157
Query: 737 HMDGGQIDGQ 766
+G I+G+
Sbjct: 158 EFNGTTIEGR 167
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+H+ + + +F G V +E + +G+ +V N D+A A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE---RGSKGFGFVTMQNPDDADRARA 157
Query: 737 HMDGGQIDGQ 766
+G I+G+
Sbjct: 158 EFNGTTIEGR 167
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+++G++ N + YG + +I G+A+V+F ++ +A +A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 737 HMDGGQIDG 763
+DG ++G
Sbjct: 54 DLDGKTMEG 62
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+++G++ N + YG + +I G+A+V+F ++ +A +A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 737 HMDGGQIDG 763
+DG ++G
Sbjct: 54 DLDGKTMEG 62
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+++G++ N + YG + +I G+A+V+F ++ +A +A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 737 HMDGGQIDG 763
+DG ++G
Sbjct: 54 DLDGKTMEG 62
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 557 RIHIGRLTLNV-TRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAM 733
R+ IG + + TRD I E+F +G + ++ + +G+ +V+FN A A +
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNY-------FAQQGFGFVQFNEAGSADESC 136
Query: 734 KHMDG 748
+ ++G
Sbjct: 137 RSLNG 141
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 264 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 317
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 264 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 317
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 596 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 748
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 422 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 473
>AC024875-4|AAK29990.1| 143|Caenorhabditis elegans U2af splicing
factor protein 1,isoform b protein.
Length = 143
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 596 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 748
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 69 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 120
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 596 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 748
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 422 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 473
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 596 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 748
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 397 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 448
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 596 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAXNAMKHMDG 748
+ + + S YG V+S+E P HP G G +VEF + + A + G
Sbjct: 400 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTG 451
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+ G L V+ + + + F Y + + + + + +GY +V F ++++ AM+
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRES-RTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 737 HMDG 748
MDG
Sbjct: 263 EMDG 266
>Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 29.5 bits (63), Expect = 2.7
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 646
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.5 bits (63), Expect = 2.7
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 646
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 29.5 bits (63), Expect = 2.7
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 646
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.5 bits (63), Expect = 2.7
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE 646
+H+ ++ + TRDHI+ +F+ G ++ ++
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLK 40
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+ +G L V + E+FS +G + +G+G+A++ + A +A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--------SGKGFAFLRLDTRAHAESAKE 168
Query: 737 HMDGGQIDGQ 766
+DG I G+
Sbjct: 169 AIDGRIIHGR 178
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R+ +G L V + E+FS +G + +G+G+A++ + A +A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--------SGKGFAFLRLDTRAHAESAKE 168
Query: 737 HMDGGQIDGQ 766
+DG I G+
Sbjct: 169 AIDGRIIHGR 178
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 566 IGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAXNAMKHM 742
IG + + T + + ++F+ G + + R++ + +GY ++EF DEA + +
Sbjct: 72 IGDVPTDWTEETLSQVFTECGHAP---YKVKRVYVKDELKGYCFIEFITFDEARQTLYDL 128
Query: 743 DGGQIDG 763
+G +I G
Sbjct: 129 NGNRIPG 135
>Z82060-3|CAB04883.1| 206|Caenorhabditis elegans Hypothetical
protein T27F6.4 protein.
Length = 206
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 420 LEIDHQQETKKNLCYLYQMTKLKLRKN--RNDLQDVRSENAHHHHDQL 557
LE+ + ++KN+ +T LK RK + L V S + HHHH L
Sbjct: 80 LELKKKDRSEKNV-----VTNLKYRKPTANHHLDSVHSSSEHHHHHHL 122
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 501 RNDLQDVRSENAHHHHDQLVSTL 569
+N +Q + + AHHHH QLV +
Sbjct: 126 QNLVQQQQQQQAHHHHQQLVGEM 148
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 501 RNDLQDVRSENAHHHHDQLVSTL 569
+N +Q + + AHHHH QLV +
Sbjct: 126 QNLVQQQQQQQAHHHHQQLVGEM 148
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 501 RNDLQDVRSENAHHHHDQLVSTL 569
+N +Q + + AHHHH QLV +
Sbjct: 159 QNLVQQQQQQQAHHHHQQLVGEM 181
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = -3
Query: 311 SWMMKMNVMNFLSYWMMTERMTLKNYLMN-----FHYYHCCWSLSHLSFSCFLWVSSSLS 147
SW NV N S++ T+ N L++ + Y C + +S +W+ S
Sbjct: 181 SWFFDPNVGNDPSFYHNIPH-TINNLLVSASSTPLYIYLCYHLIFKFGYSTSMWLYRSKQ 239
Query: 146 QLQAKAIYF*PFSTYYVFIYV 84
Q+ +A+ F +IYV
Sbjct: 240 QIVIQAVILCSFHAVAAYIYV 260
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
I+IG L+ ++ + +FS YG V +I D+ +G+A++ + + A+ +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDK-DTGKSKGFAFLCYKDQRSTILAVDN 98
Query: 740 MDG 748
+G
Sbjct: 99 FNG 101
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 501 RNDLQDVRSENAHHHHDQLVSTL 569
+N +Q + + AHHHH QLV +
Sbjct: 159 QNLVQQQQQQQAHHHHQQLVGEM 181
>AF022969-2|AAB69893.2| 354|Caenorhabditis elegans Hypothetical
protein C29G2.4 protein.
Length = 354
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -3
Query: 305 MMKMNVMNFLSYWMMTERMTLKNYLMNFHYYHCCWSLSH-LSFSCFLWVSSSLSQLQAKA 129
M+ N +L+Y + TL L Y+H C+ L +S +W+ S Q+ A+
Sbjct: 189 MIGNNPKIYLNYTTVVNN-TLSTVLTTGMYFHLCYYLIFKFGYSTSMWLYKSKRQIIAQG 247
Query: 128 IY--F*PFSTYYVFIYV 84
I F ST ++ YV
Sbjct: 248 IILTFFHASTSIIYEYV 264
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 557 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMK 736
R++IGRL + + F YG + + G+ +V+F + +A +A+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMK---------NGFGFVDFQDQRDADDAVH 53
Query: 737 HMDGGQIDGQ 766
++G ++ G+
Sbjct: 54 DLNGKELCGE 63
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 560 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAXNAMKH 739
+ I R+ + F +G V I +R N +G+AYV F+N A A +
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNR-RTGNHKGWAYVGFDNKAVAEIAAES 92
Query: 740 MDG 748
M+G
Sbjct: 93 MNG 95
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 502
NKSP + +DR++ R RS D+KK + + +E++
Sbjct: 52 NKSPSRSESVSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERR 94
>AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical
protein Y46G5A.15 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 435 QQETKKNLCYLYQMTKLKLRKNRNDLQDVRSENAHHHH 548
Q+ET+++L L Q+ + RK+R+ + + N++ HH
Sbjct: 16 QEETRRDLERLAQLNQSTSRKSRDRYRRSPNRNSNRHH 53
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 374 NKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEKQ 502
NKSP + +DR++ R RS D+KK + + +E++
Sbjct: 52 NKSPSRSESVSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERR 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,332,379
Number of Sequences: 27780
Number of extensions: 238114
Number of successful extensions: 935
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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