Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_F18
(460 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 32 0.003
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 32 0.003
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 29 0.016
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 27 0.064
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 27 0.064
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 0.26
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 23 1.0
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 1.4
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 23 1.4
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 1.4
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 3.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 7.3
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.003
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAPRTAPL 248
GE+ YRC C+ +F+ + AH+ + H E P P+
Sbjct: 18 GEKPYRCIDCNKSFSQAANLTAHV-RTHSGEKPFRCPV 54
Score = 30.7 bits (66), Expect = 0.007
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
GE+ +RC VCD F+ + H+ + H E P
Sbjct: 46 GEKPFRCPVCDRRFSQSSSVTTHM-RTHSGERP 77
Score = 29.1 bits (62), Expect = 0.021
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
GER YRC +C F+ + H+ + H E P
Sbjct: 74 GERPYRCRLCKKAFSDSSTLTKHL-RIHSGEKP 105
Score = 23.0 bits (47), Expect = 1.4
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGA 272
GE+ Y C +C F+ + H+ + HGA
Sbjct: 102 GEKPYECKLCLLRFSQSGNLNRHM-RVHGA 130
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 31.9 bits (69), Expect = 0.003
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAPRTAPL 248
GE+ YRC C+ +F+ + AH+ + H E P P+
Sbjct: 274 GEKPYRCIDCNKSFSQAANLTAHV-RTHSGEKPFRCPV 310
Score = 30.7 bits (66), Expect = 0.007
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
GE+ +RC VCD F+ + H+ + H E P
Sbjct: 302 GEKPFRCPVCDRRFSQSSSVTTHM-RTHSGERP 333
Score = 29.1 bits (62), Expect = 0.021
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
GER YRC +C F+ + H+ + H E P
Sbjct: 330 GERPYRCRLCKKAFSDSSTLTKHL-RIHSGEKP 361
Score = 23.0 bits (47), Expect = 1.4
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGA 272
GE+ Y C +C F+ + H+ + HGA
Sbjct: 358 GEKPYECKLCLLRFSQSGNLNRHM-RVHGA 386
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 29.5 bits (63), Expect = 0.016
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
GER ++C +C F TK ++ H+ H A+ P
Sbjct: 159 GERPFKCKICGRAFTTKGNLKTHM-GVHRAKPP 190
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 27.5 bits (58), Expect = 0.064
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
GER YRC CD F + H+ + H E P
Sbjct: 34 GERPYRCEHCDRQFVQVANLRRHL-RVHTGERP 65
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 27.5 bits (58), Expect = 0.064
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
GER YRC CD F + H+ + H E P
Sbjct: 187 GERPYRCEHCDRQFVQVANLRRHL-RVHTGERP 218
Score = 27.1 bits (57), Expect = 0.084
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHI 290
GER Y C C F+ Q++AH+
Sbjct: 215 GERPYGCEHCSMKFSDSNQLKAHV 238
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.4 bits (53), Expect = 0.26
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 5/27 (18%)
Frame = -1
Query: 343 CTVCDGTFNTKKQMEAHI-----YKEH 278
C VCD F++ K++ H+ YKEH
Sbjct: 550 CKVCDQAFSSLKELSNHMVKNSHYKEH 576
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 23.4 bits (48), Expect = 1.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 346 RCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
+CT+C F+ ++ HI + H E P
Sbjct: 9 KCTICPKAFSRPWLLQGHI-RTHTGEKP 35
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.0 bits (47), Expect = 1.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEH 278
G + ++C CD T K + +H+ K H
Sbjct: 255 GSKPFQCNKCDYTCVNKSMLNSHM-KSH 281
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 23.0 bits (47), Expect = 1.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEH 278
G + ++C CD T K + +H+ K H
Sbjct: 13 GSKPFQCNKCDYTCVNKSMLNSHM-KSH 39
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.0 bits (47), Expect = 1.4
Identities = 7/29 (24%), Positives = 14/29 (48%)
Frame = -1
Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHG 275
GE+ + C +C+ F + H+ +G
Sbjct: 371 GEKRFACPICNKRFMRSDHLAKHVKTHNG 399
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.8 bits (44), Expect = 3.2
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 258 PHHYRVQHQWLPMVK*CVT 202
P+ + H W+P+++ CV+
Sbjct: 469 PYDSLLWHTWMPVMRICVS 487
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 271 EAPRTAPLQSTTPMAADG 218
E+P AP + TP+++ G
Sbjct: 9 ESPPPAPQSAATPISSSG 26
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,365
Number of Sequences: 336
Number of extensions: 1407
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -