Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F18
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    30   0.045
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    29   0.078
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.1  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   6.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   9.0  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 0.045
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEH 278
           G+R ++C +CD ++ TK Q + H Y+ H
Sbjct: 346 GQR-FQCNLCDMSYRTKLQYQKHEYEVH 372


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 29.1 bits (62), Expect = 0.078
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 361 GERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAP 263
           G + +RC  CD  F T  ++  HI   H  E P
Sbjct: 179 GTKPHRCKHCDNCFTTSGELIRHIRYRHTHERP 211



 Score = 28.7 bits (61), Expect = 0.10
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 361 GERCYRCTVCDGTFNTKKQMEAHI 290
           GE+CYRC  C     + + +E+H+
Sbjct: 351 GEKCYRCEYCPYASISMRHLESHL 374



 Score = 25.4 bits (53), Expect = 0.96
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 358 ERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAPR 260
           +R ++C VC+  F T   ++ H+    G +  R
Sbjct: 152 DRPHKCVVCERGFKTLASLQNHVNTHTGTKPHR 184



 Score = 25.4 bits (53), Expect = 0.96
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 361 GERCYRCTVCDGTFNTKKQMEAH 293
           GE+ Y C VC   F     ++AH
Sbjct: 264 GEKPYSCDVCFARFTQSNSLKAH 286



 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 358 ERCYRCTVCDGTFNTKKQMEAHIYKEHGAEAPRTAP 251
           ER ++CT CD       +++ HI + H  E P   P
Sbjct: 209 ERPHKCTECDYASVELSKLKRHI-RTHTGEKPFQCP 243


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 349 YRCTVCDGTFNTKKQMEAHIYKEH 278
           + C VC   F  +  M+AH   +H
Sbjct: 923 HECPVCGQKFTRRDNMKAHCKVKH 946


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 224 GSHWCCTL*WCGAGG 268
           G H CC    CG GG
Sbjct: 285 GQHCCCRGSHCGGGG 299


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 296 PYLQRTWRGSPPHRTITEYNTNGCRW 219
           P  +R  R SP HR    +   G RW
Sbjct: 226 PQQRRFHRQSPAHRRKPRWRRAGRRW 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,627
Number of Sequences: 2352
Number of extensions: 6685
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)