Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F16
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.92 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 405  HHSCRSVQQQNVYLQGHIQPWFCSIGLH 322
            H SC S     V + GH+ P  C+ GLH
Sbjct: 1215 HESCSSFY---VCVNGHLVPQNCAPGLH 1239


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 239 FCC*SPICDFKYEMKSTTANHFAI*QL*AYDFSSELSD 126
           FC    +C   Y++  T   +FAI ++  YD S ++ +
Sbjct: 258 FCSLVALCLTMYKLSLTEDLYFAIYEMHWYDASKQIQN 295


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 660 KLYEKTDKTALLGYSDDQAKLELVDIGGP 746
           K+Y   D T LLGY+  +    +++I  P
Sbjct: 279 KIYHPEDITNLLGYAKLRGVRIIIEIDAP 307


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 270 LRHEEFSEGCEAACNGPYANRWSKTM 347
           ++ E   E C  + N PY N +  ++
Sbjct: 49  VKEEPIYESCRFSINQPYLNHFDNSV 74


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 270 LRHEEFSEGCEAACNGPYANRWSKTM 347
           ++ E   E C  + N PY N +  ++
Sbjct: 49  VKEEPIYESCRFSINQPYLNHFDNSV 74


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 270 LRHEEFSEGCEAACNGPYANRWSKTM 347
           ++ E   E C  + N PY N +  ++
Sbjct: 49  VKEEPIYESCRFSINQPYLNHFDNSV 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,745
Number of Sequences: 336
Number of extensions: 3797
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)