Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F16
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   1.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   4.7  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   4.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   6.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   6.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.2  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 67  IIIHRLNNHTKYIHSLS 117
           +I+HRLNNH + +  LS
Sbjct: 495 VILHRLNNHIERVQGLS 511


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -3

Query: 538 PPGASTYFRPLCSL--IGQLL 482
           PPG S+ +RPLC L  +G++L
Sbjct: 543 PPGESSSYRPLCMLDALGKVL 563


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -3

Query: 538 PPGASTYFRPLCSL--IGQLL 482
           PPG S+ +RPLC L  +G++L
Sbjct: 558 PPGESSSYRPLCMLDALGKVL 578


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -3

Query: 538 PPGASTYFRPLCSL--IGQLL 482
           PPG++  +RPLC L  +G++L
Sbjct: 550 PPGSNGSYRPLCMLDALGKVL 570


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -3

Query: 538 PPGASTYFRPLC--SLIGQLL 482
           PPG  + +RP+C  S++G++L
Sbjct: 483 PPGEPSSYRPICLLSVLGKIL 503


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 478 CALFRLSLDCTVMPRKSFPCS 416
           C +F   LDC     + FPCS
Sbjct: 480 CPVFLQWLDCVHQIHRQFPCS 500


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 478 CALFRLSLDCTVMPRKSFPCS 416
           C +F   LDC     + FPCS
Sbjct: 480 CPVFLQWLDCVHQIHRQFPCS 500


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
 Frame = +3

Query: 351  GYGP-EDTHFVVELTYNYGVT--HYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGLKY 521
            G+ P E  HF  E  + +  T    + GN FL ++ Q    L    T   P+  +    +
Sbjct: 1339 GFEPYERNHFGKEKKWTFDKTLIKSQNGNSFLTLS-QPEHKLAGVFTPQEPLMNYVISCW 1397

Query: 522  VEAPGGYKFY----IVDKPQPVDKDPIVKVSLASSNLAKSIAYWNGLLTL 659
            V      K      IV     V+K    K+SL  + + + I  WN + T+
Sbjct: 1398 VRTSKALKLGDTVDIVAVDVLVEKGEEKKISLRKAEVKQRIGSWNYVETI 1447


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -3

Query: 535 PGASTYFRPLCSL--IGQLLVCALFRLSLDCTVMPRKS 428
           PG S+ +RPLC L  +G++L   +    L+    P+ S
Sbjct: 506 PGESSSYRPLCMLDALGKVLERLILNRHLEDPDSPQLS 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,901
Number of Sequences: 2352
Number of extensions: 16007
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)