Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F14
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.6  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   3.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   6.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.3  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = -2

Query: 631 FTNSSFWLRICVQTSDCESPL--IYNILYFSSIAIKV 527
           F   +FW+ +    S+ E      YNILYFS I   +
Sbjct: 308 FRALTFWIIVAPAGSNFEIGFENYYNILYFSRIMFHI 344


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 128 LLYTVSKFLYGTFSL*LICYLNCI*KLQKYQVLLYTWNCLEA 3
           +LY +   LY    L ++ +L  I K+Q + +++ T  C+ A
Sbjct: 273 ILYILESLLYMVTKLVVVTFLKFIKKIQIFGIMI-TKACMSA 313


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 311  INNQFSELLTYPLNCKKTYSN 373
            INN++ +    P+  +KT SN
Sbjct: 1354 INNEYEDQTEVPVEMRKTVSN 1374


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 311  INNQFSELLTYPLNCKKTYSN 373
            INN++ +    P+  +KT SN
Sbjct: 1354 INNEYEDQTEVPVEMRKTVSN 1374


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 696 LFLYNLFKSKKVFPPPIK 643
           LF+Y +  ++K FP P K
Sbjct: 87  LFIYGMHHNEKYFPEPEK 104


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 412 QQKCLTTRCHNGR 374
           + KC+T +C NG+
Sbjct: 870 EYKCVTCKCENGK 882


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 71  YLNCI*KLQKYQVLLYTWNCLEA 3
           Y N   + Q YQ+LL T  C EA
Sbjct: 177 YNNSPDQYQSYQILLPTPTCSEA 199


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 671 LLKRLYKNNLVQLMKSKIDD 730
           LLKRL    ++ L+ SKI D
Sbjct: 421 LLKRLNGRGVIHLVPSKIRD 440


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 533 DGYTTKIKNVIDQWGFTVTGL 595
           D +T + K V+D  G TVT L
Sbjct: 357 DYFTIETKTVLDVLGVTVTYL 377


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 533 DGYTTKIKNVIDQWGFTVTGL 595
           D +T + K V+D  G TVT L
Sbjct: 283 DYFTIETKTVLDVLGVTVTYL 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,264
Number of Sequences: 336
Number of extensions: 3858
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)