Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F13
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   1.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   1.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   1.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   7.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   7.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   7.1  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 224 AHFLTSPTWRQLHF*QLSSTPLVYFSFFLVTHKTSIL 114
           A F    T  QL + Q++ TP+++ +  L+T+   ++
Sbjct: 148 AKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 224 AHFLTSPTWRQLHF*QLSSTPLVYFSFFLVTHKTSIL 114
           A F    T  QL + Q++ TP+++ +  L+T+   ++
Sbjct: 148 AKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVI 184


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 231 QKCDLSLVRSCYPRASLQRHPHSRHLRRQ 317
           +KCDL     C  R  LQ    S+H  R+
Sbjct: 82  EKCDLPFNIDCTSRPKLQEPQPSQHCPRK 110


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 604 SVGIHLFSYKGTLGRPSPMIGGRIVAFDPP 515
           SVG++   Y  T   P P IG    AF  P
Sbjct: 6   SVGVYGAPYPSTDQNPYPSIGVESSAFYSP 35


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 4   FGRPMSCYSVLSGCVDVLEL 63
           F   +SC SV+ GC+  L++
Sbjct: 95  FSSLLSCCSVIFGCIFALKV 114


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 4   FGRPMSCYSVLSGCVDVLEL 63
           F   +SC SV+ GC+  L++
Sbjct: 95  FSSLLSCCSVIFGCIFALKV 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,610
Number of Sequences: 336
Number of extensions: 3889
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)